RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 SEPT4O43236 478 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 NDUFS3O75489 264 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 REM1O75628 298 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 ADAP1O75689 374 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 DFFBO76075 338 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 CSTAP01040 98 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 IFNA6P05013 189 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 LPOP22079 712 aaPredicted RBP8.59□□□□□ -1.03
PTPRA-204ENST00000380393 KLF3P57682 345 aaPredicted RBP8.59□□□□□ -1.03
PTPRA-204ENST00000380393 TMEM115Q12893 351 aaPredicted RBP8.59□□□□□ -1.03
PTPRA-204ENST00000380393 MST1LQ2TV78 715 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 MRNIPQ6NTE8 343 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 TMEM220Q6QAJ8 160 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 KMT5CQ86Y97 462 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 OR1J1Q8NGS3 322 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 OR8U1Q8NH10 309 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 OR4K15Q8NH41 348 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 MFRPQ9BY79 579 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF430Q9H8G1 570 aaPredicted RBP8.59□□□□□ -1.03
PTPRA-204ENST00000380393 TMEM100Q9NV29 134 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 CLEC5AQ9NY25 188 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 KCND3Q9UK17 655 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 PADI1Q9ULC6 663 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 CAMK2AQ9UQM7 478 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 NOD1Q9Y239 953 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 SZT2Q5T011 3432 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 TMEM272A0A1B0GTI8 110 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 RNF222A6NCQ9 220 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 OR5H14A6NHG9 310 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 MASP2O00187 686 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 PRICKLE3O43900 615 aaPredicted RBP8.59□□□□□ -1.03
PTPRA-204ENST00000380393 NDUFB6O95139 128 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 CLDN9O95484 217 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 FGBP02675 491 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 CD74P04233 296 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 IGFBP6P24592 240 aaPredicted RBP8.59□□□□□ -1.03
PTPRA-204ENST00000380393 BRS3P32247 399 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 CASRP41180 1078 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 TFPI2P48307 235 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 RAP1BP61224 184 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 ABRAXAS2Q15018 415 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 SLC9A3R2Q15599 337 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 C10orf120Q5SQS8 335 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 EIF5AL1Q6IS14 154 aaKnown RBP8.59□□□□□ -1.03
PTPRA-204ENST00000380393 CELF5Q8N6W0 485 aaKnown RBP8.59□□□□□ -1.03
PTPRA-204ENST00000380393 OR5D16Q8NGK9 328 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 RHEBL1Q8TAI7 183 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 PPP1R16AQ96I34 528 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 ATG5Q9H1Y0 275 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 ADAM18Q9Y3Q7 739 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 MGAMO43451 1857 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 IGKV6-21A0A0C4DH24 114 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 TMEM269A0A1B0GVZ9 245 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 IQCF5A8MTL0 148 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 DCTN6O00399 190 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 GSTZ1O43708 216 aaPredicted RBP8.59□□□□□ -1.04
PTPRA-204ENST00000380393 DUSP11O75319 330 aaKnown RBP8.59□□□□□ -1.04
PTPRA-204ENST00000380393 RPP40O75818 363 aaKnown RBP8.59□□□□□ -1.04
PTPRA-204ENST00000380393 SNRPBP14678 240 aaKnown RBP8.59□□□□□ -1.04
PTPRA-204ENST00000380393 GALP22466 123 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 SELENOTP62341 195 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 RING1Q06587 406 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 IL10RAQ13651 578 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 NKPD1Q17RQ9 610 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 SLC25A35Q3KQZ1 300 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 IFI44LQ53G44 452 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 CHST9Q7L1S5 443 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 P4HA3Q7Z4N8 544 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 IQCF1Q8N6M8 205 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 SLC35G3Q8N808 338 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 OR52I2Q8NH67 350 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 OR14C36Q8NHC7 312 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 CDS1Q92903 461 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 BOD1Q96IK1 185 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 ADAM19Q9H013 955 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 SLC25A31Q9H0C2 315 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 SYT4Q9H2B2 425 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 CHST11Q9NPF2 352 aa8.59□□□□□ -1.04
PTPRA-204ENST00000380393 TLR8Q9NR97 1041 aaKnown RBP8.59□□□□□ -1.04
PTPRA-204ENST00000380393 PUS1Q9Y606 427 aaKnown RBP eCLIP8.59□□□□□ -1.04
PTPRA-204ENST00000380393 LOC100509620A0A075B734 347 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 CCL25O15444 150 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 KDELR3O43731 214 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 WISP3O95389 354 aaPredicted RBP8.58□□□□□ -1.04
PTPRA-204ENST00000380393 MMP2P08253 660 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 CST2P09228 141 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 ST6GAL1P15907 406 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 GRK4P32298 578 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 HAGHQ16775 308 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 FAM27D1Q5T7N8 215 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 TANGO2Q6ICL3 276 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 ZNF621Q6ZSS3 439 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 FRMD1Q8N878 549 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 INO80EQ8NBZ0 244 aaPredicted RBP8.58□□□□□ -1.04
PTPRA-204ENST00000380393 TMEM159Q96B96 161 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 WFIKKN1Q96NZ8 548 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 TSSK3Q96PN8 268 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 ORAI3Q9BRQ5 295 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 ACTR3CQ9C0K3 210 aaPredicted RBP8.58□□□□□ -1.04
PTPRA-204ENST00000380393 LINC00597Q9H2U6 94 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms