RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 GIPP09681 153 aaPredicted RBP11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 ZNF35P13682 527 aa11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 H2BFSP57053 126 aa11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 RAP2BP61225 183 aa11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 TRA2BP62995 288 aaKnown RBP11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 DHODHQ02127 395 aa11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 SNTB1Q13884 538 aaKnown RBP11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 ZNF619Q8N2I2 560 aa11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 MFSD9Q8NBP5 474 aa11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 C7orf50Q9BRJ6 194 aaKnown RBP11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 ANKRD19PQ9H560 264 aa11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 NOX3Q9HBY0 568 aa11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 SLC35A3Q9Y2D2 325 aa11.4□□□□□ -0.59
PRPF40B-202ENST00000380281 PRSS38A1L453 326 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 LINC01553A4QN01 128 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 HTR3BO95264 441 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 HIST1H2ABP04908 130 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 EPXP11678 715 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 CALCRP30988 508 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 DCTDP32321 178 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 GPR18Q14330 331 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 SLC22A10Q63ZE4 541 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 HIST3H2AQ7L7L0 130 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 GJD3Q8N144 294 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 HIST1H2ACQ93077 130 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 RERGQ96A58 199 aaPredicted RBP11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 PAPOLGQ9BWT3 736 aaKnown RBP11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 TCEAL2Q9H3H9 227 aaPredicted RBP11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 HRASLSQ9HDD0 168 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 CMC2Q9NRP2 79 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 HRASLS2Q9NWW9 162 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 COLEC10Q9Y6Z7 277 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 LOC100509620A0A075B734 347 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 A0A0G2JK05 382 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 CSN2P05814 226 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 STARP49675 285 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 EEF1A1P68104 462 aaKnown RBP11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 PLA2G7Q13093 441 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 UBXN2BQ14CS0 331 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 OR7E24Q6IFN5 339 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 TMEM17Q86X19 198 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 LNX2Q8N448 690 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 GAS2L1Q99501 681 aaPredicted RBP11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 THAP10Q9P2Z0 257 aaPredicted RBP11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 GHRLQ9UBU3 117 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 WDFY3Q8IZQ1 3526 aa11.39□□□□□ -0.59
PRPF40B-202ENST00000380281 A0A0A6YYC8 382 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 TMEM72A0PK05 275 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 OR2M5A3KFT3 312 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 I3L1I5 382 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 CREBL2O60519 120 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 UBL3O95164 117 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 IFNA4P05014 189 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 LIPCP11150 499 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 NID1P14543 1247 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 ADCYAP1P18509 176 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 NFYBP25208 207 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 MMP15P51511 669 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 CCR9P51686 369 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 RAG2P55895 527 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 Q3ZCU0 254 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 BEX5Q5H9J7 111 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 AVPI1Q5T686 147 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 NAXDQ8IW45 347 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 PGLYRP3Q96LB9 341 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 Q96M85 177 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 OR2M4Q96R27 311 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 HDAC8Q9BY41 377 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 PBX4Q9BYU1 374 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 MFFQ9GZY8 342 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 ZMAT3Q9HA38 289 aaKnown RBP11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 ISYNA1Q9NPH2 558 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 LRIT1Q9P2V4 623 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 MAFFQ9ULX9 164 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 PCDHGA5Q9Y5G8 931 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 CDC14CA4D256 554 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 ST8SIA5O15466 376 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 KLF4O43474 513 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 ICOSLGO75144 302 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 FGF19O95750 216 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 PLGP00747 810 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 CELA2BP08218 269 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 LSSP48449 732 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 SIRPAP78324 504 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 SORDQ00796 357 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 PON3Q15166 354 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 DCAF12L2Q5VW00 463 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 HEPHL1Q6MZM0 1159 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 MRGPREQ86SM8 312 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 PRR22Q8IZ63 422 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 DVL3Q92997 716 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 GAL3ST3Q96A11 431 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 LMAN2LQ9H0V9 348 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 GPN3Q9UHW5 284 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 MEX3AA1L020 520 aaKnown RBP11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 APODP05090 189 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 KLK3P07288 261 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 RPS21P63220 83 aaKnown RBP11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 ARHGAP11BQ3KRB8 267 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 LINC00303Q3SY05 128 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms