RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PGRMC2O15173 223 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 OGG1O15527 345 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 RNF13O43567 381 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF821O75541 412 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 RPLP1P05386 114 aaKnown RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 FAM157CP0CG43 387 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 PRSS56P0CW18 603 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 PRPS1L1P21108 318 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 PCGF2P35227 344 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 MC3RP41968 323 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 RPS10P46783 165 aaKnown RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 DHPSP49366 369 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CDKN3Q16667 212 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 NKPD1Q17RQ9 610 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 RIPPLY2Q5TAB7 128 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 C22orf39Q6P5X5 142 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 TPGS1Q6ZTW0 290 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 LRRC70Q7Z2Q7 622 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CLECL1Q8IZS7 167 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 JAGN1Q8N5M9 183 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HORMAD2Q8N7B1 307 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 TEX19Q8NA77 164 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HSD17B11Q8NBQ5 300 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 OR5D16Q8NGK9 328 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 RNF141Q8WVD5 230 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 TNFAIP8L1Q8WVP5 186 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 SPRYD4Q8WW59 207 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 GALNT14Q96FL9 552 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CCDC74BQ96LY2 380 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 WDR92Q96MX6 357 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 YPEL4Q96NS1 127 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 DIRC2Q96SL1 478 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF649Q9BS31 505 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 C20orf24Q9BUV8 137 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 SLITRK2Q9H156 845 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 GSX1Q9H4S2 264 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 GPATCH2Q9NW75 528 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF337Q9Y3M9 751 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 A0A087WUJ7 227 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 C9J4A7 227 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 M0QZK8 103 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HIST1H2BKO60814 126 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CPSF4O95639 269 aaKnown RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 F13BP05160 661 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HIST1H2BJP06899 126 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 TBC1D3HP0C7X1 549 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HIST1H2BOP23527 126 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 DCTDP32321 178 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HIST1H2BBP33778 126 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 DLSTP36957 453 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CASRP41180 1078 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 SULT1A1P50225 295 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HIST1H2BDP58876 126 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HIST1H2BCP62807 126 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 ACSM1Q08AH1 577 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 NFATC2Q13469 925 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 IHHQ14623 411 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HIST2H2BEQ16778 126 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HIST2H3PS2Q5TEC6 136 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 PSAPL1Q6NUJ1 521 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 OGFOD3Q6PK18 319 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 TTLL10Q6ZVT0 673 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 TMPRSS11BQ86T26 416 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CFAP52Q8N1V2 620 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 NXPE1Q8N323 547 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 OR5AP2Q8NGF4 316 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CD200R1Q8TD46 325 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HIST1H2BHQ93079 126 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 SLC25A38Q96DW6 304 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 PACRGQ96M98 296 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HIST1H2BNQ99877 126 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HIST1H2BMQ99879 126 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 TRPV4Q9HBA0 871 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 KRCC1Q9NPI7 259 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CBLN4Q9NTU7 201 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CALML5Q9NZT1 146 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 KCND3Q9UK17 655 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 SIRT4Q9Y6E7 314 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 PTPRSQ13332 1948 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 KIF26AQ9ULI4 1882 aaPredicted RBP6.84□□□□□ -1.31
CDKL5-201ENST00000379989 ANKRD20A5PA0PJZ0 165 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 FFAR1O14842 300 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 MAGEB4O15481 346 aaPredicted RBP6.84□□□□□ -1.31
CDKL5-201ENST00000379989 CTNSO60931 367 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 LINC00271P0C7V0 271 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 GZMBP10144 247 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 ATF1P18846 271 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 TEAD1P28347 426 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 CEACAM8P31997 349 aaPredicted RBP6.84□□□□□ -1.31
CDKL5-201ENST00000379989 CD80P33681 288 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 OPRD1P41143 372 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 MTNR1AP48039 350 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 TMEM115Q12893 351 aaPredicted RBP6.84□□□□□ -1.31
CDKL5-201ENST00000379989 LMAN2Q12907 356 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 ATXN7L3Q14CW9 347 aaPredicted RBP6.84□□□□□ -1.31
CDKL5-201ENST00000379989 OR7A5Q15622 319 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 ACOT7LQ6ZUV0 252 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 TRAPPC5Q8IUR0 188 aa6.84□□□□□ -1.31
CDKL5-201ENST00000379989 BEST3Q8N1M1 668 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms