RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PTOV1Q86YD1 416 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 FBXO22Q8NEZ5 403 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 OR5R1Q8NH85 324 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 TMEM40Q8WWA1 233 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 ACPTQ9BZG2 426 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 CWH43Q9H720 699 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 CAPN10Q9HC96 672 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 GKN1Q9NS71 199 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 ENPP4Q9Y6X5 453 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 TRBV11-1A0A0K0K1C0 115 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 GABARAPH6UMI1 98 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 TMIGD3P0DMS9 266 aaPredicted RBP10.88□□□□□ -0.67
NPHP4-202ENST00000378161 RAB7AP51149 207 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 SELENOWP63302 87 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 ABRAXAS2Q15018 415 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 Q6ZRG5 221 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 Q8NFD4 153 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 SECTM1Q8WVN6 248 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 MCHR2Q969V1 340 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 POMT1Q9Y6A1 747 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 A0A1W2PPE3 182 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 EREGO14944 169 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 SYT7O43581 403 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 AIFM1O95831 613 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 TAS2R41P59536 307 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 TMEM115Q12893 351 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-202ENST00000378161 KHDC3LQ587J8 217 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 NFKBIDQ8NI38 313 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 NUDCD2Q8WVJ2 157 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 PPP1R16AQ96I34 528 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 TRIB3Q96RU7 358 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 VAMP8Q9BV40 100 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 SGPP1Q9BX95 441 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 RNF208Q9H0X6 261 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 CA10Q9NS85 328 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 PSME4Q14997 1843 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 A0A1W2PS29 197 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 TARM1B6A8C7 271 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 CNOT4O95628 575 aaKnown RBP10.87□□□□□ -0.67
NPHP4-202ENST00000378161 CYB5AP00167 134 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 IGHEP01854 428 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 HLA-AP01891 365 aaKnown RBP10.87□□□□□ -0.67
NPHP4-202ENST00000378161 HTR6P50406 440 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 RAB28P51157 221 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 CAV2P51636 162 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 ERVPABLB-1P60509 514 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 ERVFC1-1P60608 527 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 HTRA3P83110 453 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 SLC17A1Q14916 467 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 PSAPL1Q6NUJ1 521 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 VITQ6UXI7 678 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 OOSP2Q86WS3 158 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 PNPLA1Q8N8W4 532 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 OR8J2Q8NGG1 315 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 OR2D3Q8NGH3 330 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 OR52I2Q8NH67 350 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 SMIM4Q8WVI0 70 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 ABHD1Q96SE0 405 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 ZNF426Q9BUY5 554 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 TCFL5Q9UL49 500 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 AK6Q9Y3D8 172 aaKnown RBP10.87□□□□□ -0.67
NPHP4-202ENST00000378161 NRAPQ86VF7 1730 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 GJE1A6NN92 205 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 A6NNC1 897 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 DVL1O14640 695 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 MBPP02686 304 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-202ENST00000378161 CHRNB4P30926 498 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 HNRNPA3P51991 378 aaKnown RBP10.87□□□□□ -0.67
NPHP4-202ENST00000378161 STXBP1P61764 594 aaKnown RBP10.87□□□□□ -0.67
NPHP4-202ENST00000378161 DNLZQ5SXM8 178 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 GDF6Q6KF10 455 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-202ENST00000378161 C11orf87Q6NUJ2 197 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 TMCO2Q7Z6W1 182 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-202ENST00000378161 GJD3Q8N144 294 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 GPBAR1Q8TDU6 330 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 ROBO4Q8WZ75 1007 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 CASD1Q96PB1 797 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 OR1F2PQ96R84 312 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 RNF2Q99496 336 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 EFCAB11Q9BUY7 163 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 LAT2Q9GZY6 243 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 TUBB1Q9H4B7 451 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 RCC2Q9P258 522 aaKnown RBP10.87□□□□□ -0.67
NPHP4-202ENST00000378161 OARD1Q9Y530 152 aa10.87□□□□□ -0.67
NPHP4-202ENST00000378161 UNC119BA6NIH7 251 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 H0YIV9 168 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 LDB2O43679 373 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 OR2J2O76002 312 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 CLDN7O95471 211 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 PTNP21246 168 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 GJA4P35212 333 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 SSR2P43308 183 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 FXYD6P3P58550 94 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 LINC00303Q3SY05 128 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 POM121L1PQ3SYA9 428 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 UBE2NLQ5JXB2 153 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 MRPL38Q96DV4 380 aaKnown RBP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 HHIPL1Q96JK4 782 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 ZNF385AQ96PM9 386 aaKnown RBP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 ATOH8Q96SQ7 321 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms