RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ACSS1Q9NUB1 689 aaPredicted RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 ENTPD2Q9Y5L3 495 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 FCGR2AP12318 317 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 DUSP6Q16828 381 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 NXNL2Q5VZ03 156 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 KDM4DQ6B0I6 523 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 TMEM207Q6UWW9 146 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 ZNF836Q6ZNA1 936 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC41A2Q96JW4 573 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 DCLRE1CQ96SD1 692 aaKnown RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 NKX3-1Q99801 234 aaPredicted RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 KATNB1Q9BVA0 655 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 MED17Q9NVC6 651 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 KLHL42Q9P2K6 505 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 LAMB1P07942 1786 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 H0Y8G0 127 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 MMP2P08253 660 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 IL9P15248 144 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 ANXA7P20073 488 aaKnown RBP11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 HTR1FP30939 366 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 S100A11P31949 105 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 MAGEB1P43366 347 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 POU3F1Q03052 451 aaPredicted RBP11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 HMGN3Q15651 99 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 ESPNLQ6ZVH7 1005 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 BTLAQ7Z6A9 289 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 TMEM178AQ8NBL3 297 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 TMEM174Q8WUU8 243 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 NICN1Q9BSH3 213 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 ALX3O95076 343 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 TGFBR1P36897 503 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 TAS2R46P59540 309 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 KCNJ10P78508 379 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 CLVS2Q5SYC1 327 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 PFN4Q8NHR9 129 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 TM4SF18Q96CE8 201 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 ZNF578Q96N58 590 aaPredicted RBP11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 SELENOFO60613 162 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 KIAA1024LP59773 190 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 RPE65Q16518 533 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 LYPD8Q6UX82 237 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 GDF7Q7Z4P5 450 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 LINC01599Q8WXQ3 324 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 FBXW5Q969U6 566 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 NMNAT3Q96T66 252 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 EMC9Q9Y3B6 208 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 PLCH1Q4KWH8 1693 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 TMEM212A6NML5 194 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 H0YIV9 168 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 HTR2CP28335 458 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 GPLD1P80108 840 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 MFGE8Q08431 387 aaPredicted RBP11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 MELKQ14680 651 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 RNF113BQ8IZP6 322 aaKnown RBP11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 SCARB1Q8WTV0 552 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 RSC1A1Q92681 617 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 NKX6-2Q9C056 277 aaPredicted RBP11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 LIN7BQ9HAP6 207 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 C1orf123Q9NWV4 160 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 SDHAF2Q9NX18 166 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 CNTRLQ7Z7A1 2325 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 IGHEP01854 428 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 RFC3P40938 356 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 PAN3Q58A45 887 aaKnown RBP11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 GAREM2Q75VX8 874 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 LRRC56Q8IYG6 542 aaPredicted RBP11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 KLHDC9Q8NEP7 349 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 OR52H1Q8NGJ2 320 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 FAM213BQ8TBF2 198 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 ALG12Q9BV10 488 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 WBP1LQ9NX94 342 aa11.08□□□□□ -0.64
PCDHA9-201ENST00000378122 SULT1C4O75897 302 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 HLA-FP30511 346 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 HNRNPA1L2Q32P51 320 aaKnown RBP11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 OR2A12Q8NGT7 310 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 CEBPZOSA8MTT3 80 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 SLC2A1P11166 492 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 FOXK2Q01167 660 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 RAB31Q13636 194 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 HEPHL1Q6MZM0 1159 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 ZNF705AQ6ZN79 300 aaPredicted RBP11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 TOX2Q96NM4 488 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 CMSS1Q9BQ75 279 aaKnown RBP11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 CLEC1BQ9P126 229 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 STEAP1Q9UHE8 339 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 ZC3H12DA2A288 527 aaKnown RBP11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 ADAM23O75077 832 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 ZNF780AO75290 641 aaPredicted RBP11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 UBL3O95164 117 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 OMGP23515 440 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 RTL6Q6ICC9 239 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 C2CD4CQ8TF44 421 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 CA5BP1Q8WTZ4 195 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 RNF141Q8WVD5 230 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 CCDC74AQ96AQ1 378 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 SLC39A13Q96H72 371 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 FYTTD1Q96QD9 318 aaKnown RBP11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 TCRBV5S1A1TA0A578 114 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 SULT1B1O43704 296 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 IGHG1P01857 330 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms