RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CD300LGQ6UXG3 332 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 MDGA2Q7Z553 956 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 OR56B1Q8NGI3 324 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 NAA11Q9BSU3 229 aaPredicted RBP8.07□□□□□ -1.12
PCDH9-202ENST00000377865 PRRG4Q9BZD6 226 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 KPTNQ9Y664 436 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 TRAV36DV7A0A075B6V5 113 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 A0A087WV62 115 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 A0A0A6YYH2 397 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 A6NJ64 397 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 ZNF264O43296 627 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 SLC16A7O60669 478 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 ITGBL1O95965 494 aaPredicted RBP8.07□□□□□ -1.12
PCDH9-202ENST00000377865 HEXBP07686 556 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 TRHRP34981 398 aaPredicted RBP8.07□□□□□ -1.12
PCDH9-202ENST00000377865 RSU1Q15404 277 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 OR10K2Q6IF99 312 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 FAM111BQ6SJ93 734 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 HIST2H3AQ71DI3 136 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 GABRG1Q8N1C3 465 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 KDM8Q8N371 416 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 LMX1AQ8TE12 382 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 DPF3Q92784 378 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 CNTNAP3Q9BZ76 1288 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 FLVCR2Q9UPI3 526 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 ZNF236Q9UL36 1845 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 ZFC3H1O60293 1989 aaKnown RBP8.07□□□□□ -1.12
PCDH9-202ENST00000377865 HRO43593 1189 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 SPI1P17947 270 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 CLDN6P56747 220 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 YBX1P67809 324 aaKnown RBP8.07□□□□□ -1.12
PCDH9-202ENST00000377865 TMEM151BQ8IW70 566 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 SULF2Q8IWU5 870 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 FAM160A2Q8N612 972 aaPredicted RBP8.07□□□□□ -1.12
PCDH9-202ENST00000377865 PDCD1LG2Q9BQ51 273 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 IL23AQ9NPF7 189 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 MYEF2Q9P2K5 600 aaKnown RBP8.07□□□□□ -1.12
PCDH9-202ENST00000377865 EXO1Q9UQ84 846 aaKnown RBP8.07□□□□□ -1.12
PCDH9-202ENST00000377865 LSM2Q9Y333 95 aaKnown RBP8.07□□□□□ -1.12
PCDH9-202ENST00000377865 OR51B4Q9Y5P0 310 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 K7EPK0 472 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 SNRNP70P08621 437 aaKnown RBP8.07□□□□□ -1.12
PCDH9-202ENST00000377865 EMP2P54851 167 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 CLDN2P57739 230 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 OC90Q02509 493 aaPredicted RBP8.07□□□□□ -1.12
PCDH9-202ENST00000377865 HHEXQ03014 270 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 NFATC4Q14934 902 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 PDSS1Q5T2R2 415 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 SLC22A24Q8N4F4 322 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 FAM71E2Q8N5Q1 922 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 SLC25A31Q9H0C2 315 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 A0A0G2JMZ2 1700 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 TMEM269A0A1B0GVZ9 245 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 RFPL4AA6NLU0 287 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 LRRC37A2A6NM11 1700 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 NPIPA2E9PIF3 369 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 RFPL4AL1F8VTS6 287 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 NPIPA3F8WFD2 350 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 H0YGG7 62 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 RAD1O60671 282 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 NDUFB6O95139 128 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 LIPCP11150 499 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 VIPR2P41587 438 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 POLR2HP52434 150 aaKnown RBP8.06□□□□□ -1.12
PCDH9-202ENST00000377865 ARF3P61204 181 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-202ENST00000377865 TLE3Q04726 772 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 SGCAQ16586 387 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 MCEMP1Q8IX19 187 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 JSRP1Q96MG2 331 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-202ENST00000377865 DCBLD2Q96PD2 775 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 ZNF649Q9BS31 505 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 ZBP1Q9H171 429 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 ZNF275Q9NSD4 429 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-202ENST00000377865 DKKL1Q9UK85 242 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 UBE2J1Q9Y385 318 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-202ENST00000377865 ZNFX1Q9P2E3 1918 aaKnown RBP8.06□□□□□ -1.12
PCDH9-202ENST00000377865 FAM221BA6H8Z2 402 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 HMSDA8MTL9 139 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 TP53I11O14683 189 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 PLA2G10O15496 165 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 KNG1P01042 644 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 CPN1P15169 458 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 ACHEP22303 614 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 AFF3P51826 1226 aaKnown RBP8.06□□□□□ -1.12
PCDH9-202ENST00000377865 UNQ6126/PRO20091Q6UXV3 157 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 CCDC71Q8IV32 467 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-202ENST00000377865 OR51D1Q8NGF3 324 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 OR8D4Q8NGM9 314 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 SLC17A5Q9NRA2 495 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 RNF186Q9NXI6 227 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 NTNG1Q9Y2I2 539 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 GPR55Q9Y2T6 319 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-202ENST00000377865 E9PI62 339 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 BET1O15155 118 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 XRCC3O43542 346 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 IGHA1P01876 353 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 RRASP10301 218 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 RAB6AP20340 208 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 CNR1P21554 472 aa8.06□□□□□ -1.12
PCDH9-202ENST00000377865 HOXC8P31273 242 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms