RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 RAB25P57735 213 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 MAP4K2Q12851 820 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 TAB1Q15750 504 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 CLEC12AQ5QGZ9 265 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 CNIH2Q6PI25 160 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 ZNF619Q8N2I2 560 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 ACBD7Q8N6N7 88 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 SYT14Q8NB59 555 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 ST6GALNAC3Q8NDV1 305 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 OR7G2Q8NG99 324 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 OR5M3Q8NGP4 307 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 C16orf52Q8NHV5 167 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 OTULINQ96BN8 352 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 CTHRC1Q96CG8 243 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 RNF170Q96K19 258 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 STACQ99469 402 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 TMEM246Q9BRR3 403 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 OR10A5Q9H207 317 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 UBQLN3Q9H347 655 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 NIPAL2Q9H841 368 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 ABI3Q9P2A4 366 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 NPIPA1Q9UND3 350 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 C19orf53Q9UNZ5 99 aaPredicted RBP11.19□□□□□ -0.62
VRK3-202ENST00000377011 BAIAP2Q9UQB8 552 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 OSGIN2Q9Y236 505 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 FRS3O43559 492 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 RCBTB2O95199 551 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 THY1P04216 161 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 ATP1B1P05026 303 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 CD46P15529 392 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 PAICSP22234 425 aaKnown RBP11.18□□□□□ -0.62
VRK3-202ENST00000377011 DNASE1L1P49184 302 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 TAS2R43P59537 309 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.18□□□□□ -0.62
VRK3-202ENST00000377011 ZNF791Q3KP31 576 aaPredicted RBP11.18□□□□□ -0.62
VRK3-202ENST00000377011 YIF1BQ5BJH7 314 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 C6orf183Q5T699 404 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 HACD4Q5VWC8 232 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 NIPAL3Q6P499 406 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 PLET1Q6UQ28 207 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 LHFPL3Q86UP9 236 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 PLCZ1Q86YW0 608 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 GPALPP1Q8IXQ4 340 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 LNX2Q8N448 690 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 SLC16A11Q8NCK7 471 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 ATP6V1C2Q8NEY4 427 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 OR4F15Q8NGB8 312 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 OR10G3Q8NGC4 313 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 OR52R1Q8NGF1 315 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 OR8K3Q8NH51 312 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 NUBPLQ8TB37 319 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 SPRYD4Q8WW59 207 aaPredicted RBP11.18□□□□□ -0.62
VRK3-202ENST00000377011 CDS1Q92903 461 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 ZG16BQ96DA0 208 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 C5orf34Q96MH7 638 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 SECISBP2Q96T21 854 aaKnown RBP11.18□□□□□ -0.62
VRK3-202ENST00000377011 KCNJ15Q99712 375 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 TMEM43Q9BTV4 400 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 NDEL1Q9GZM8 345 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 NXF5Q9H1B4 397 aaKnown RBP11.18□□□□□ -0.62
VRK3-202ENST00000377011 MARCH7Q9H992 704 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 SH2D2AQ9NP31 389 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 HINT3Q9NQE9 182 aaKnown RBP11.18□□□□□ -0.62
VRK3-202ENST00000377011 DUSP22Q9NRW4 184 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 COPS7AQ9UBW8 275 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 ADGRG4Q8IZF6 3080 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 SLC22A31A6NKX4 558 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 ARHGEF9O43307 516 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 FCMRO60667 390 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 APOL3O95236 402 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 LALBAP00709 142 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 CELA3AP09093 270 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 EDN3P14138 238 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 CELP19835 753 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 GALNSP34059 522 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 ATP6V1E1P36543 226 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 KIR2DL3P43628 341 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 GPR4P46093 362 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 EMDP50402 254 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 FBXW4P57775 412 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 FHL5Q5TD97 284 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 PRAMEF20Q5VT98 475 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 C1QL3Q5VWW1 255 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 TMPRSS11FQ6ZWK6 438 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 MEPCEQ7L2J0 689 aaKnown RBP11.18□□□□□ -0.62
VRK3-202ENST00000377011 HMGN2P46Q86SG4 172 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 TPRA1Q86W33 373 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 Q8N402 240 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 CDRT4Q8N9R6 151 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 FANK1Q8TC84 345 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 TMEM255BQ8WV15 326 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 HS6ST2Q96MM7 605 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 SDF2Q99470 211 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 PRSS27Q9BQR3 290 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 OR52D1Q9H346 318 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 TRIM36Q9NQ86 728 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 HPF1Q9NWY4 346 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 BABAM2Q9NXR7 383 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 COMMD3Q9UBI1 195 aa11.18□□□□□ -0.62
VRK3-202ENST00000377011 SLC7A7Q9UM01 511 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms