RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 INMT-MINDY4F8WBC2 141 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 ZNF264O43296 627 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 GMDSO60547 372 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 ZNF354AO60765 605 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 DXOO77932 396 aaKnown RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 GPANK1O95872 356 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 IGFBP3P17936 291 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 SDHBP21912 280 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 BLKP51451 505 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 RPL6Q02878 288 aaKnown RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 FCN2Q15485 313 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 CD276Q5ZPR3 534 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 PRSS42Q7Z5A4 293 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 OR10AC1Q8NH08 325 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 RLN3Q8WXF3 142 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 CCDC74AQ96AQ1 378 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 MVB12AQ96EY5 273 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 C7orf50Q9BRJ6 194 aaKnown RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 WDR76Q9H967 626 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 FANCFQ9NPI8 374 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 RPRD1BQ9NQG5 326 aaKnown RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 PRODH2Q9UF12 536 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 ELF5Q9UKW6 265 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 IGLV3-12A0A075B6K2 115 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 MEIKINA0A087WXM9 373 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 IGHV1OR21-1A0A087WYE8 117 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 FLRT2O43155 660 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 NAGAP17050 411 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 CENPAP49450 140 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 GBX2P52951 348 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 C19orf57Q0VDD7 668 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 C14orf28Q4W4Y0 310 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 TCTE1Q5JU00 501 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 SNAP47Q5SQN1 464 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 SLC6A19Q695T7 634 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 STAC2Q6ZMT1 411 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 BTN2A1Q7KYR7 527 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 NFAM1Q8NET5 270 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 ATOH1Q92858 354 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 CITED4Q96RK1 184 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 WWTR1Q9GZV5 400 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 CUTCQ9NTM9 273 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 BRWD1Q9NSI6 2320 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 A0A1B0GTH9 108 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 ACOD1A6NK06 481 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 HSPB2A8KAH6 182 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 ALX3O95076 343 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 CD3GP09693 182 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 TMIGD3P0DMS9 266 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 CALCBP10092 127 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 ATP6V1E1P36543 226 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 RPS7P62081 194 aaKnown RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 ROM1Q03395 351 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 EGR3Q06889 387 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 ELOCQ15369 112 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 HSPB2Q16082 182 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 C1QL3Q5VWW1 255 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 PRSS45Q7RTY3 260 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 FAM109AQ8N4B1 249 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 ZNF511Q8NB15 262 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 CEP76Q8TAP6 659 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 ZNF501Q96CX3 271 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 HSPA12BQ96MM6 686 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 MESP1Q9BRJ9 268 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 KLHL13Q9P2N7 655 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 AK6Q9Y3D8 172 aaKnown RBP8.67□□□□□ -1.02
TRIM39-202ENST00000376659 KNL1Q8NG31 2342 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 A0A1W2PPK0 400 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 TMEM72A0PK05 275 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 FAM25AB3EWG3 89 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 FAM25CB3EWG5 89 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 FAM25GB3EWG6 89 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 ONECUT2O95948 504 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 CD38P28907 300 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 CCR6P51684 374 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 SCAND1P57086 179 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 INSM1Q01101 510 aaPredicted RBP8.66□□□□□ -1.02
TRIM39-202ENST00000376659 ALKBH1Q13686 389 aaKnown RBP8.66□□□□□ -1.02
TRIM39-202ENST00000376659 ELAVL1Q15717 326 aaKnown RBP8.66□□□□□ -1.02
TRIM39-202ENST00000376659 NTRK2Q16620 822 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 BCL2L15Q5TBC7 163 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 CHRDL2Q6WN34 429 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 CCDC28AQ8IWP9 274 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 ADAMTS14Q8WXS8 1223 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 GCDHQ92947 438 aaPredicted RBP8.66□□□□□ -1.02
TRIM39-202ENST00000376659 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.66□□□□□ -1.02
TRIM39-202ENST00000376659 TGIF2Q9GZN2 237 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 SLC25A18Q9H1K4 315 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 SLC23A1Q9UHI7 598 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 MRPS33Q9Y291 106 aaKnown RBP8.66□□□□□ -1.02
TRIM39-202ENST00000376659 FAM240BA0A1B0GVZ2 78 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 TRABD2BA6NFA1 517 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 OR6C70A6NIJ9 312 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 B8ZZF3 427 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 ARL6IP5O75915 188 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 EDNRAP25101 427 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 PON3Q15166 354 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 ALG10Q5BKT4 473 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 PRAMEF17Q5VTA0 474 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 CREB3L2Q70SY1 520 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms