RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 CCNIQ14094 377 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 BLOC1S3Q6QNY0 202 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 LRP11Q86VZ4 500 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 RFLNBQ8N5W9 214 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 SCAIQ8N9R8 606 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 FGFBP3Q8TAT2 258 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 RNF217Q8TC41 542 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 TLCD1Q96CP7 247 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 FOXB1Q99853 325 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 SYT3Q9BQG1 590 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 TMEM27Q9HBJ8 222 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 MRPL39Q9NYK5 338 aaKnown RBP12.85□□□□□ -0.35
CLCN6-204ENST00000376491 NKIRAS1Q9NYS0 192 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 MYEF2Q9P2K5 600 aaKnown RBP12.85□□□□□ -0.35
CLCN6-204ENST00000376491 REV1Q9UBZ9 1251 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 POFUT2Q9Y2G5 429 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 GMEB1Q9Y692 573 aa12.85□□□□□ -0.35
CLCN6-204ENST00000376491 M0R233 179 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 PLPP3O14495 311 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 TCF21O43680 179 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 SYNGR3O43761 229 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 HPXP02790 462 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 ITGA2P17301 1181 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 GPX2P18283 190 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 SRP14P37108 136 aaKnown RBP12.84□□□□□ -0.35
CLCN6-204ENST00000376491 ALDH3B1P43353 468 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 GIPRP48546 466 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 PTDSS1P48651 473 aaKnown RBP12.84□□□□□ -0.35
CLCN6-204ENST00000376491 DVL1P1P54792 670 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-204ENST00000376491 CDH12P55289 794 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 RGS8P57771 180 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-204ENST00000376491 PUDPQ08623 228 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 PMS2P3Q13401 168 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 SCARB2Q14108 478 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 MAD2L1BPQ15013 274 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-204ENST00000376491 FXNQ16595 210 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 KRT73Q86Y46 540 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 OR6N1Q8NGY5 312 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 SPDL1Q96EA4 605 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 EPYCQ99645 322 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 EBF4Q9BQW3 602 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 SPATA5L1Q9BVQ7 753 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 ASPNQ9BXN1 380 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 ULBP2Q9BZM5 246 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 TMEM38AQ9H6F2 299 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 TMBIM4Q9HC24 238 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 NOX1Q9Y5S8 564 aa12.84□□□□□ -0.35
CLCN6-204ENST00000376491 WNT9BO14905 357 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 SERPINI2O75830 405 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 PATE4P0C8F1 98 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 AHCYP23526 432 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 AQP1P29972 269 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 IDH3AP50213 366 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 STX1BP61266 288 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 NCALDP61601 193 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 RAB1AP62820 205 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 RAB39AQ14964 217 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 TRMT5Q32P41 509 aaKnown RBP12.83□□□□□ -0.36
CLCN6-204ENST00000376491 LINC00114Q6XXX2 140 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 WDR88Q6ZMY6 472 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 RINLQ6ZS11 566 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 PXKQ7Z7A4 578 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 ZNF584Q8IVC4 421 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 CLDND2Q8NHS1 167 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 YIPF5Q969M3 257 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 TMEM43Q9BTV4 400 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 RACGAP1Q9H0H5 632 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 MS4A5Q9H3V2 200 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 B3GAT2Q9NPZ5 323 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 TCF7L2Q9NQB0 619 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 SELENONQ9NZV5 590 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 CCDC167Q9P0B6 97 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 FZR1Q9UM11 496 aa12.83□□□□□ -0.36
CLCN6-204ENST00000376491 DYSFO75923 2080 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 ZNF726A6NNF4 738 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 FAM157AC9JC47 383 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 C11orf98E9PRG8 122 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 NCR1O76036 304 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 MFN2O95140 757 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 PPIBP23284 216 aaKnown RBP12.82□□□□□ -0.36
CLCN6-204ENST00000376491 SLC6A2P23975 617 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 BIDP55957 195 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 SKA3Q8IX90 412 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 C10orf53Q8N6V4 93 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 SMYD1Q8NB12 490 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 TMEM54Q969K7 222 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 NARFLQ9H6Q4 476 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 SLCO1B3Q9NPD5 702 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 SPEF1Q9Y4P9 236 aa12.82□□□□□ -0.36
CLCN6-204ENST00000376491 PRORSD1PA6NEY8 169 aa12.81□□□□□ -0.36
CLCN6-204ENST00000376491 B4DSR2 109 aa12.81□□□□□ -0.36
CLCN6-204ENST00000376491 M0R3H8 397 aa12.81□□□□□ -0.36
CLCN6-204ENST00000376491 POLR3GO15318 223 aaPredicted RBP12.81□□□□□ -0.36
CLCN6-204ENST00000376491 UBL3O95164 117 aa12.81□□□□□ -0.36
CLCN6-204ENST00000376491 LYPD3O95274 346 aa12.81□□□□□ -0.36
CLCN6-204ENST00000376491 RAB36O95755 333 aa12.81□□□□□ -0.36
CLCN6-204ENST00000376491 THY1P04216 161 aa12.81□□□□□ -0.36
CLCN6-204ENST00000376491 ADORA3P0DMS8 318 aa12.81□□□□□ -0.36
CLCN6-204ENST00000376491 ACHEP22303 614 aa12.81□□□□□ -0.36
CLCN6-204ENST00000376491 GPR6P46095 362 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms