RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 CNIH2Q6PI25 160 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 PIWIL3Q7Z3Z3 882 aaKnown RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 XYLT1Q86Y38 959 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 DOLPP1Q86YN1 238 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 TMEM217Q8N7C4 229 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 RAB7BQ96AH8 199 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 IER2Q9BTL4 223 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 TMEM82A0PJX8 343 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SLC22A31A6NKX4 558 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ALG1L2C9J202 215 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ANHXE9PGG2 379 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ALX3O95076 343 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SFTPDP35247 375 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 PPP1CCP36873 323 aaKnown RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 EIF1P41567 113 aaKnown RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 KCNJ10P78508 379 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 DLK1P80370 383 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 NSUN5P2Q63ZY6 315 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ZNF485Q8NCK3 441 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 IL31RAQ8NI17 732 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 IL1F10Q8WWZ1 152 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SUSD6Q92537 303 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 NSUN5Q96P11 429 aaKnown RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 CLSTN3Q9BQT9 956 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 NRSN2Q9GZP1 204 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SHARPINQ9H0F6 387 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 RANGRFQ9HD47 186 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 MIOXQ9UGB7 285 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SLC25A20O43772 301 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 P04436 131 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SLC35E2BP0CK96 405 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ITGB7P26010 798 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 OSCARQ8IYS5 282 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 LCN9Q8WX39 176 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 PEBP4Q96S96 227 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 TET2Q6N021 2002 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 C1QTNF3-AMACRE9PGA6 284 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 DLX3O60479 287 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 EIF1BO60739 113 aaKnown RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 GSTP1P09211 210 aaKnown RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 LHX1P48742 406 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 EFEMP1Q12805 493 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 EDDM3AQ14507 147 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 CST9Q5W186 159 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 C18orf63Q68DL7 685 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 OR4F3Q6IEY1 312 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 RPUSD3Q6P087 351 aaKnown RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 LCN15Q6UWW0 184 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 WDR5BQ86VZ2 330 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 APOBEC3FQ8IUX4 373 aaKnown RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 CA13Q8N1Q1 262 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ANKRD29Q8N6D5 301 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 DTWD2Q8NBA8 298 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 OR5AU1Q8NGC0 362 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 OR13J1Q8NGT2 312 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ZNF317Q96PQ6 595 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ELOVL4Q9GZR5 314 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 MRPL16Q9NX20 251 aaKnown RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SPCS1Q9Y6A9 102 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 TRAV18A0A075B6X5 111 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 HTR5AP47898 357 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 CASP7P55210 303 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SOX8P57073 446 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ERVS71-1P61550 626 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 MEF2CQ06413 473 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 FZD2Q14332 565 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 MLF2Q15773 248 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SPIN4Q56A73 249 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 GDPGP1Q6ZNW5 385 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 LRRTM4Q86VH4 590 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 OR9Q2Q8NGE9 314 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 CYP2W1Q8TAV3 490 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SYNPRQ8TBG9 265 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 WDR18Q9BV38 432 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 BANF2Q9H503 90 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 EHFQ9NZC4 300 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 PPIP5K1Q6PFW1 1433 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 TIAM1Q13009 1591 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ANK1P16157 1881 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ADGRF5Q8IZF2 1346 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 A0A1W2PPC4 97 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 TMEM221A6NGB7 291 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 TRAPPC2LH3BP13 241 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 M0R296 226 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 MT-CO3P00414 261 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ORM2P19652 201 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SRP14P37108 136 aaKnown RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 NMUP48645 174 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 TEAD2Q15562 447 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 NSDHLQ15738 373 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 FAM98CQ17RN3 349 aaKnown RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 C19orf54Q5BKX5 351 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 RNFT1Q5M7Z0 435 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 ZNF776Q68DI1 518 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 LRFN4Q6PJG9 635 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 NIT1Q86X76 327 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 OR2T6Q8NHC8 308 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 LKAAEAR1Q8TD35 194 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 BOCQ9BWV1 1114 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 TXNIPQ9H3M7 391 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms