RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 NDUFS8O00217 210 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 EDF1O60869 148 aaKnown RBP12.32□□□□□ -0.44
NELFE-201ENST00000375425 MT-ATP6P00846 226 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 THY1P04216 161 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 IGHV4-31P0DP07 118 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 CD79AP11912 226 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 NPR2P20594 1047 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 NR4A2P43354 598 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 PIGFQ07326 219 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 GGTLC2Q14390 218 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 PODNL1Q6PEZ8 512 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 WDR88Q6ZMY6 472 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 PATL1Q86TB9 770 aaKnown RBP12.32□□□□□ -0.44
NELFE-201ENST00000375425 SLC30A8Q8IWU4 369 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 ZCCHC24Q8N2G6 241 aaKnown RBP12.32□□□□□ -0.44
NELFE-201ENST00000375425 OR6N1Q8NGY5 312 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 VANGL1Q8TAA9 524 aaPredicted RBP12.32□□□□□ -0.44
NELFE-201ENST00000375425 ADAMTS16Q8TE57 1224 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 DOK1Q99704 481 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 PIMREGQ9BSJ6 248 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 ULBP2Q9BZM5 246 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 RAB1BQ9H0U4 201 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 ZNF442Q9H7R0 627 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 TMEM129A0AVI4 362 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 SH3PXD2BA1X283 911 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 hCG_2039718K7EN88 272 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 OR6A2O95222 327 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 CH25HO95992 272 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 IFNGR1P15260 489 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 B4GALT1P15291 398 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 PPOXP50336 477 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 GZMMP51124 257 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 DAG1Q14118 895 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 ZNF74Q16587 644 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 GSG1Q2KHT4 349 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 METTL21CQ5VZV1 264 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 KRT80Q6KB66 452 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 TTC33Q6PID6 262 aaPredicted RBP12.31□□□□□ -0.44
NELFE-201ENST00000375425 ZNF813Q6ZN06 617 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 ZNF627Q7L945 461 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 SPATA21Q7Z572 469 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 TSPYL5Q86VY4 417 aaPredicted RBP12.31□□□□□ -0.44
NELFE-201ENST00000375425 SVOPLQ8N434 492 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 SPATA3Q8NHX4 192 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 SLC26A7Q8TE54 656 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 TAMM41Q96BW9 452 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 MS4A3Q96HJ5 214 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 SIKE1Q9BRV8 207 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 NOX3Q9HBY0 568 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 NANSQ9NR45 359 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 TAS2R5Q9NYW4 299 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 FBXO9Q9UK97 447 aaPredicted RBP12.31□□□□□ -0.44
NELFE-201ENST00000375425 CDC42EP3Q9UKI2 254 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 SLC7A7Q9UM01 511 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 RTTNQ86VV8 2226 aa12.31□□□□□ -0.44
NELFE-201ENST00000375425 TRAPPC13A5PLN9 417 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 FBP2O00757 339 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 LYPD3O95274 346 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 CD247P20963 164 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 NR4A1P22736 598 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 PCGF2P35227 344 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 BIDP55957 195 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 ZP4Q12836 540 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 VMACQ2NL98 169 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 IQCCQ4KMZ1 466 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 INTS11Q5TA45 600 aaKnown RBP12.3□□□□□ -0.44
NELFE-201ENST00000375425 NANOGP8Q6NSW7 305 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 SLC35D2Q76EJ3 337 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 SNX32Q86XE0 403 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 LRRC17Q8N6Y2 441 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 ZNF540Q8NDQ6 660 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 ZNF75AQ96N20 296 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 FOXB1Q99853 325 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 BEX2Q9BXY8 128 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 NANOGQ9H9S0 305 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 MYOZ1Q9NP98 299 aaPredicted RBP12.3□□□□□ -0.44
NELFE-201ENST00000375425 ARGLU1Q9NWB6 273 aaPredicted RBP12.3□□□□□ -0.44
NELFE-201ENST00000375425 TMEM160Q9NX00 188 aa12.3□□□□□ -0.44
NELFE-201ENST00000375425 IGHV4-61A0A0C4DH41 118 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 KPNA4O00629 521 aaPredicted RBP12.29□□□□□ -0.44
NELFE-201ENST00000375425 LMX1BO60663 402 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 H2AFXP16104 143 aaPredicted RBP12.29□□□□□ -0.44
NELFE-201ENST00000375425 ZNF14P17017 642 aaPredicted RBP12.29□□□□□ -0.44
NELFE-201ENST00000375425 ZNF16P17020 682 aaPredicted RBP12.29□□□□□ -0.44
NELFE-201ENST00000375425 PTDSS1P48651 473 aaKnown RBP12.29□□□□□ -0.44
NELFE-201ENST00000375425 CSNK1A1P48729 337 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 GZMKP49863 264 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 CRYBA2P53672 197 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 RAB1AP62820 205 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 SNTB2Q13425 540 aaKnown RBP12.29□□□□□ -0.44
NELFE-201ENST00000375425 CYLC2Q14093 348 aaPredicted RBP12.29□□□□□ -0.44
NELFE-201ENST00000375425 CCDC80Q76M96 950 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 OR6X1Q8NH79 312 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 NEU4Q8WWR8 484 aaPredicted RBP12.29□□□□□ -0.44
NELFE-201ENST00000375425 RASSF5Q8WWW0 418 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 MPP4Q96JB8 637 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 TMEM120AQ9BXJ8 343 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 PCDHAC1Q9H158 963 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 GLTPQ9NZD2 209 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 ZNF224Q9NZL3 707 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms