RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 C5orf46Q6UWT4 87 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 DCXRQ7Z4W1 244 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 MORN4Q8NDC4 146 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 CSNK2A3Q8NEV1 391 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 BEST4Q8NFU0 473 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 HSD17B8Q92506 261 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 LRFN1Q9P244 771 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 ITGB1BP2Q9UKP3 347 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 KCNS2Q9ULS6 477 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 A4GNTQ9UNA3 340 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 KCNIP3Q9Y2W7 256 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 P2RY10O00398 339 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 KNG1P01042 644 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 GABRR1P24046 479 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 ACBD4Q8NC06 268 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 GIMAP5Q96F15 307 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 CMC2Q9NRP2 79 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 TMEFF2Q9UIK5 374 aaPredicted RBP16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 ZNF346Q9UL40 294 aaKnown RBP16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 WIF1Q9Y5W5 379 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 A0A1W2PPV9 198 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 SHISA8B8ZZ34 492 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 RAB3DO95716 219 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 ATP1B1P05026 303 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 ENPP1P22413 925 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 NR4A2P43354 598 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 ACTBP60709 375 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 ACTG1P63261 375 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 PHC2Q8IXK0 858 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 OR2L13Q8N349 312 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 ASB17Q8WXJ9 295 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 ZMAT3Q9HA38 289 aaKnown RBP16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 PLEKHJ1Q9NW61 149 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 EMC3Q9P0I2 261 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 FUOMA2VDF0 154 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 GLCEO94923 617 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 HOXC4P09017 264 aaPredicted RBP16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 EPHA8P29322 1005 aaPredicted RBP16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 RPS19P39019 145 aaKnown RBP16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 LSSP48449 732 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 HNRNPFP52597 415 aaKnown RBP16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 UNQ6126/PRO20091Q6UXV3 157 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 SYT9Q86SS6 491 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 MFSD8Q8NHS3 518 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 HCAR1Q9BXC0 346 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 WWTR1Q9GZV5 400 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 PAQR5Q9NXK6 330 aaPredicted RBP16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 EEF1E1-BLOC1S5C9J1V9 151 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 CREBL2O60519 120 aaPredicted RBP16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 PTTG1O95997 202 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 C1QCP02747 245 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 FUCA1P04066 466 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 FXYD4P59646 89 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 RPL27P61353 136 aaKnown RBP16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 C3orf33Q6P1S2 294 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 BAIAP2L2Q6UXY1 529 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 UBE3DQ7Z6J8 389 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 SNIP1Q8TAD8 396 aaKnown RBP16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 GABARAPL3Q9BY60 117 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 OR2S2Q9NQN1 319 aa16.42■□□□□ 0.22
PTPDC1-202ENST00000375360 KIF13BQ9NQT8 1826 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 IGHV4-34P06331 123 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 ANXA3P12429 323 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 SERPINA2P20848 420 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 GRK1Q15835 563 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 ZNF813Q6ZN06 617 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 BEND4Q6ZU67 534 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 HAVCR2Q8TDQ0 301 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 COPZ2Q9P299 210 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 NOTOA8MTQ0 251 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 CD163Q86VB7 1156 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 GLB1L2Q8IW92 636 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 CPT1CQ8TCG5 803 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 C12orf49Q9H741 205 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 ACOXLQ9NUZ1 547 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 FKBP14Q9NWM8 211 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 BDP1A6H8Y1 2624 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 LTBQ06643 244 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 RDH10Q8IZV5 341 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 NANOGP1Q8N7R0 232 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 CREB3L1Q96BA8 519 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 ZNF350Q9GZX5 532 aa16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 SIRT3Q9NTG7 399 aaPredicted RBP16.41■□□□□ 0.22
PTPDC1-202ENST00000375360 C4orf47A7E2U8 309 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 APEHP13798 732 aaKnown RBP16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 GIFP27352 417 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 PNLIPRP2P54317 469 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 CFAP77Q6ZQR2 320 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 ADAMTS14Q8WXS8 1223 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 MIB2Q96AX9 1013 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 PPP1R14BQ96C90 147 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 APMAPQ9HDC9 416 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 EIF1BO60739 113 aaKnown RBP16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 STK17BO94768 372 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 MT-ATP6P00846 226 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 MRPL19P49406 292 aaKnown RBP16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 SNRPD2P62316 118 aaKnown RBP16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 MFAP5Q13361 173 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 ZMAT1Q5H9K5 638 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms