RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 K7EQM0 130 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 EIF4E2O60573 245 aaKnown RBP9.43□□□□□ -0.9
PTCH1-204ENST00000375290 NAT2P11245 290 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF136P52737 540 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 SCGB2A2Q13296 93 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF345Q14585 488 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 VWA2Q5GFL6 755 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 SLC35D2Q76EJ3 337 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 PIANPQ8IYJ0 282 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 OR2A14Q96R47 310 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 SFXN1Q9H9B4 322 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 SLAMF8Q9P0V8 285 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 MMACHCQ9Y4U1 282 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 DCDC2BA2VCK2 349 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF728P0DKX0 622 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 MTHFD2P13995 350 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 SGCAQ16586 387 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF789Q5FWF6 425 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 ACOXLQ9NUZ1 547 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 LHX6Q9UPM6 363 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 ECM29Q5VYK3 1845 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 TRAV36DV7A0A075B6V5 113 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 ADAMTSL4Q6UY14 1074 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 NECTIN4Q96NY8 510 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF426Q9BUY5 554 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 MS4A8Q9BY19 250 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 HNRNPKP61978 463 aaKnown RBP eCLIP9.43□□□□□ -0.9
PTCH1-204ENST00000375290 HNF4GQ14541 408 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 MRPL2Q5T653 305 aaKnown RBP9.43□□□□□ -0.9
PTCH1-204ENST00000375290 FAM71E1Q6IPT2 247 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 SCAMP4Q969E2 229 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 TOLLIPQ9H0E2 274 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.43□□□□□ -0.9
PTCH1-204ENST00000375290 IRF2P14316 349 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 NID1P14543 1247 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 RAB38P57729 211 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 PRRT3Q5FWE3 981 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 MEIKINA0A087WXM9 373 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 SIGLEC6O43699 453 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 TMEM128Q5BJH2 165 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 FAM74A1Q5RGS3 127 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 CORO6Q6QEF8 472 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 TRILQ7L0X0 811 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 LMAN1LQ9HAT1 526 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 TMEM184BQ9Y519 407 aaPredicted RBP9.43□□□□□ -0.9
PTCH1-204ENST00000375290 DGKEP52429 567 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 CCL23P55773 120 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 DUSP8Q13202 625 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 SLC48A1Q6P1K1 146 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 BTNL8Q6UX41 500 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 C14orf79Q96F83 325 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 ZIC5Q96T25 663 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 ACKR4Q9NPB9 350 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 GLI3P10071 1580 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 SERPINE3A8MV23 424 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 PTGESO14684 152 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 SLC35E2P0CK97 266 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 C4orf17Q53FE4 359 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 DDOQ99489 341 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 B3GAT1Q9P2W7 334 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 LINC00862A6NCI5 91 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 ANKRD30BLA7E2S9 258 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 SELENBP1Q13228 472 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 DPPA2Q7Z7J5 298 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 CRB3Q9BUF7 120 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 PLEKHF2Q9H8W4 249 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 ELOVL3Q9HB03 270 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 DNAJB11Q9UBS4 358 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 DPP4P27487 766 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 TEAD1P28347 426 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 SLC14A1Q13336 389 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 IAH1Q2TAA2 248 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-204ENST00000375290 TOMM40LQ969M1 308 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 BOCQ9BWV1 1114 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 TEX101Q9BY14 249 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 NXT1Q9UKK6 140 aaKnown RBP9.42□□□□□ -0.9
PTCH1-204ENST00000375290 NUPL2O15504 423 aaKnown RBP9.42□□□□□ -0.9
PTCH1-204ENST00000375290 RNGTTO60942 597 aaKnown RBP9.42□□□□□ -0.9
PTCH1-204ENST00000375290 SERPINA7P05543 415 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 FOLR1P15328 257 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF44P15621 663 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 ST7LQ8TDW4 575 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 JSRP1Q96MG2 331 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-204ENST00000375290 FZD3Q9NPG1 666 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 FER1L6Q2WGJ9 1857 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 PRR35P0CG20 571 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 ARHGAP11BQ3KRB8 267 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 XAF1Q6GPH4 301 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 NLRC3Q7RTR2 1065 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 ST8SIA2Q92186 375 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 KCNK6Q9Y257 313 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 SURF2Q15527 256 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-204ENST00000375290 HSF5Q4G112 596 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-204ENST00000375290 GCDHQ92947 438 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-204ENST00000375290 YTHDF2Q9Y5A9 579 aaKnown RBP9.42□□□□□ -0.9
PTCH1-204ENST00000375290 NHSQ6T4R5 1651 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 SCO2O43819 266 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 ICAM2P13598 275 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 AADACP22760 399 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 NSDHLQ15738 373 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms