RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 RTP4Q96DX8 246 aa13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 SERINC4A6NH21 518 aa13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 GAPDHSO14556 408 aaPredicted RBP13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 SMAD7O15105 426 aaKnown RBP13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 PKLRP30613 574 aa13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 ZNF718Q3SXZ3 478 aa13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 CBLL1Q75N03 491 aa13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 LINC01599Q8WXQ3 324 aa13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 CGGBP1Q9UFW8 167 aaPredicted RBP13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 VEZF1Q14119 521 aa13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 MISPQ8IVT2 679 aa13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 OR6V1Q8N148 313 aa13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 SMAP2Q8WU79 429 aaPredicted RBP13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 CPNE4Q96A23 557 aaPredicted RBP13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 KCNJ15Q99712 375 aa13.6□□□□□ -0.23
NOTCH4-201ENST00000375023 CACNG3O60359 315 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 PTTG1O95997 202 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 SRP9P49458 86 aaKnown RBP13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 CCR6P51684 374 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 CLDN10P78369 228 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 ZNF534Q76KX8 674 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 ZNF439Q8NDP4 499 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 ZFAND1Q8TCF1 268 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 HPSE2Q8WWQ2 592 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 ZNF486Q96H40 463 aaPredicted RBP13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 ATOH8Q96SQ7 321 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 PADI1Q9ULC6 663 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 OR10J4P0C629 311 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 MZT1Q08AG7 82 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 C9orf50Q5SZB4 431 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 OR8G2PQ6IF36 304 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 EGFL6Q8IUX8 553 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 SLC35F3Q8IY50 421 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 OR14A16Q8NHC5 309 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 GHSRQ92847 366 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 NUP188Q5SRE5 1749 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 SIGLEC1Q9BZZ2 1709 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 P2RX1P51575 399 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 INTS12Q96CB8 462 aaKnown RBP13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 DPH3Q96FX2 82 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 WDR76Q9H967 626 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 RAB9BQ9NP90 201 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 FBXO4Q9UKT5 387 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 A0A096LPE4 126 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 A0A1W2PPZ6 126 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 MBLAC1A4D2B0 266 aaPredicted RBP13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 B4GALT3O60512 393 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 NUDT1P36639 197 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 SNCAP37840 140 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 TAS2R19P59542 299 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 TATDN3Q17R31 274 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 CORO6Q6QEF8 472 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 ZNF813Q6ZN06 617 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 PAQR9Q6ZVX9 377 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 UBE2FQ969M7 185 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 C20orf24Q9BUV8 137 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 DNAJB5O75953 348 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 MMP2P08253 660 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 PPT1P50897 306 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 ZNF91Q05481 1191 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 FRMPD2BQ6IN97 320 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 TMEM104Q8NE00 496 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 ABHD4Q8TB40 342 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 UNKLQ9H9P5 680 aaKnown RBP13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 MTCH1Q9NZJ7 389 aa13.59□□□□□ -0.23
NOTCH4-201ENST00000375023 A1L4Q6 167 aa13.58□□□□□ -0.23
NOTCH4-201ENST00000375023 PTHP01270 115 aa13.58□□□□□ -0.23
NOTCH4-201ENST00000375023 GABRA4P48169 554 aa13.58□□□□□ -0.23
NOTCH4-201ENST00000375023 DCXRQ7Z4W1 244 aa13.58□□□□□ -0.23
NOTCH4-201ENST00000375023 ETFBKMTQ8IXQ9 262 aa13.58□□□□□ -0.23
NOTCH4-201ENST00000375023 EMG1Q92979 244 aaKnown RBP13.58□□□□□ -0.23
NOTCH4-201ENST00000375023 GINS3Q9BRX5 216 aa13.58□□□□□ -0.23
NOTCH4-201ENST00000375023 GLIPR2Q9H4G4 154 aa13.58□□□□□ -0.23
NOTCH4-201ENST00000375023 C1GALT1Q9NS00 363 aa13.58□□□□□ -0.23
NOTCH4-201ENST00000375023 HCRTR1O43613 425 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 GALR3O60755 368 aaPredicted RBP13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 MEF2DQ14814 521 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 PRTGQ2VWP7 1150 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 RBM45Q8IUH3 476 aaKnown RBP13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 CNTNAP3Q9BZ76 1288 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 ERVMER34-1Q9H9K5 563 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 ONECUT1Q9UBC0 465 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 OSGIN2Q9Y236 505 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 A0A1W2PRV1 198 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 ZNF891A8MT65 544 aaPredicted RBP13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 FOXE1O00358 373 aaPredicted RBP13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 CCSO14618 274 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 SIX6O95475 246 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 MPEG1Q2M385 716 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 DNAJC22Q8N4W6 341 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 C6orf106Q9H6K1 298 aaPredicted RBP13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 GPR173Q9NS66 373 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 GCAP28676 217 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 BTN1A1Q13410 526 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 RBM12BQ8IXT5 1001 aaKnown RBP13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 ANKLE1Q8NAG6 615 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 NIPSNAP1Q9BPW8 284 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 PHF7Q9BWX1 381 aaPredicted RBP13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 SLC25A31Q9H0C2 315 aa13.58□□□□□ -0.24
NOTCH4-201ENST00000375023 OPRD1P41143 372 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms