RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 DYSFO75923 2080 aa11.83□□□□□ -0.51
CXCL12-202ENST00000374426 TPST1O60507 370 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 NCR1O76036 304 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 BGLAPP02818 100 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 MSMBP08118 114 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 SAGP10523 405 aaPredicted RBP11.83□□□□□ -0.52
CXCL12-202ENST00000374426 ACHEP22303 614 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 PTDSS1P48651 473 aaKnown RBP11.83□□□□□ -0.52
CXCL12-202ENST00000374426 CAMK2DQ13557 499 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 GLIPR1L2Q4G1C9 344 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 CEP85LQ5SZL2 805 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 FAM91A1Q658Y4 838 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 ULK3Q6PHR2 472 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 DHRS4L2Q6PKH6 230 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 SLC2A7Q6PXP3 512 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 C10orf111Q8N326 155 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 SCAIQ8N9R8 606 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 OR6S1Q8NH40 331 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 YIPF5Q969M3 257 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 MOGAT1Q96PD6 335 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 FOXB1Q99853 325 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 ULBP2Q9BZM5 246 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 DENND2DQ9H6A0 471 aaPredicted RBP11.83□□□□□ -0.52
CXCL12-202ENST00000374426 ZNF275Q9NSD4 429 aaPredicted RBP11.83□□□□□ -0.52
CXCL12-202ENST00000374426 SLC25A37Q9NYZ2 338 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 TREM2Q9NZC2 230 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.83□□□□□ -0.52
CXCL12-202ENST00000374426 POFUT2Q9Y2G5 429 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 NOX1Q9Y5S8 564 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 V9GYY5 206 aaPredicted RBP11.83□□□□□ -0.52
CXCL12-202ENST00000374426 WNK2Q9Y3S1 2297 aa11.83□□□□□ -0.52
CXCL12-202ENST00000374426 C5orf58C9J3I9 102 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 LRRN3E7EW58 273 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 UBDO15205 165 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 RP2O75695 350 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 TFP02787 698 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 GAAP10253 952 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 ARAFP10398 606 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 NAT2P11245 290 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 TMEM33P57088 247 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 LMO4P61968 165 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 RPS23P62266 143 aaKnown RBP11.82□□□□□ -0.52
CXCL12-202ENST00000374426 RAB1AP62820 205 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 MRPS11P82912 194 aaKnown RBP11.82□□□□□ -0.52
CXCL12-202ENST00000374426 PUDPQ08623 228 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 GKAP1Q5VSY0 366 aaPredicted RBP11.82□□□□□ -0.52
CXCL12-202ENST00000374426 ZNF584Q8IVC4 421 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 MSRB3Q8IXL7 192 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 MIER2Q8N344 545 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 OR6N1Q8NGY5 312 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 NFKBIDQ8NI38 313 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 FGFBP3Q8TAT2 258 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 TRIM44Q96DX7 344 aaPredicted RBP11.82□□□□□ -0.52
CXCL12-202ENST00000374426 SLC47A1Q96FL8 570 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 LRRC37BQ96QE4 947 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 WFDC6Q9BQY6 131 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 ASPNQ9BXN1 380 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 RAD21L1Q9H4I0 556 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 B3GAT2Q9NPZ5 323 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 MRPL39Q9NYK5 338 aaKnown RBP11.82□□□□□ -0.52
CXCL12-202ENST00000374426 GRIP1Q9Y3R0 1128 aa11.82□□□□□ -0.52
CXCL12-202ENST00000374426 A0A0B4J2E0 115 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 A0A1B0GX12 115 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 TMEM120BA0PK00 339 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 ZNF726A6NNF4 738 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 PLPP3O14495 311 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 PPIHO43447 177 aaKnown RBP11.81□□□□□ -0.52
CXCL12-202ENST00000374426 WIPF1O43516 503 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 TPST2O60704 377 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 RGS9O75916 674 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-202ENST00000374426 RAB36O95755 333 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 PATE4P0C8F1 98 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 COMPP49747 757 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-202ENST00000374426 GALK2Q01415 458 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 PMS2P3Q13401 168 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 RAB39AQ14964 217 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 OR1Q1Q15612 314 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 REP15Q6BDI9 236 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 REEP3Q6NUK4 255 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 C1orf229Q6ZS94 237 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-202ENST00000374426 PXKQ7Z7A4 578 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 SNX32Q86XE0 403 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 OR51F2Q8NH61 342 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 RNF217Q8TC41 542 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 MGARPQ8TDB4 240 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 EPYCQ99645 322 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 SLAMF8Q9P0V8 285 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 TESQ9UGI8 421 aaKnown RBP11.81□□□□□ -0.52
CXCL12-202ENST00000374426 DUSP13Q9UII6 198 aa11.81□□□□□ -0.52
CXCL12-202ENST00000374426 TRRAPQ9Y4A5 3859 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 A0A1W2PPW3 197 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 SPRY1O43609 319 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-202ENST00000374426 SERPINI2O75830 405 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 UBL3O95164 117 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 SERPINA5P05154 406 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 AHCYP23526 432 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 CSNK1A1P48729 337 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 CDH12P55289 794 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 RGS8P57771 180 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-202ENST00000374426 NCALDP61601 193 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms