RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CRYM-AS1A6NIL9 109 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 SUSD5O60279 629 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 TRHRP34981 398 aaPredicted RBP13.24□□□□□ -0.29
TRAF1-201ENST00000373887 GDPGP1Q6ZNW5 385 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 OR10K1Q8NGX5 313 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 ADAMTS14Q8WXS8 1223 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 DVL3Q92997 716 aaPredicted RBP13.24□□□□□ -0.29
TRAF1-201ENST00000373887 ANKRD19PQ9H560 264 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 CDCP1Q9H5V8 836 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 FAM212BQ9NTI7 297 aaPredicted RBP13.24□□□□□ -0.29
TRAF1-201ENST00000373887 DECR2Q9NUI1 292 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 GPR160Q9UJ42 338 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 KCNK2O95069 426 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 TAGLN2P37802 199 aaKnown RBP13.24□□□□□ -0.29
TRAF1-201ENST00000373887 PCBD1P61457 104 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 SLC35A2P78381 396 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 LEXMQ3ZCV2 418 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF691Q5VV52 312 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 OPN5Q6U736 354 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 SLC35F3Q8IY50 421 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 SIRT6Q8N6T7 355 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 OR6C76A6NM76 312 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 SLC43A1O75387 559 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 GPR75O95800 540 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 HMGA1P17096 107 aaKnown RBP13.24□□□□□ -0.29
TRAF1-201ENST00000373887 PDE7AQ13946 482 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 GK3PQ14409 553 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 CCSMST1Q4G0I0 132 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 Q6ZPB1 254 aaPredicted RBP13.24□□□□□ -0.29
TRAF1-201ENST00000373887 CMTM2Q8TAZ6 248 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 LMF2Q9BU23 707 aaKnown RBP13.24□□□□□ -0.29
TRAF1-201ENST00000373887 ARV1Q9H2C2 271 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 ZFP92A6NM28 416 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 OR13C7P0DN81 318 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 MMP12P39900 470 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 NPSR1Q6W5P4 371 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF534Q76KX8 674 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 C15orf54Q8N8G6 183 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 BPIFCQ8NFQ6 507 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 OR5H6Q8NGV6 325 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 RAB3CQ96E17 227 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 THOC3Q96J01 351 aaKnown RBP13.24□□□□□ -0.29
TRAF1-201ENST00000373887 RNF170Q96K19 258 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 WASH6PQ9NQA3 447 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 C1GALT1Q9NS00 363 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 TMEM184BQ9Y519 407 aaPredicted RBP13.24□□□□□ -0.29
TRAF1-201ENST00000373887 PHF1O43189 567 aaPredicted RBP13.24□□□□□ -0.29
TRAF1-201ENST00000373887 RAB38P57729 211 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 RPS25P62851 125 aaKnown RBP13.24□□□□□ -0.29
TRAF1-201ENST00000373887 CAMK2BQ13554 666 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 PHYHD1Q5SRE7 291 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 HACD4Q5VWC8 232 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF740Q8NDX6 193 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 NRG4Q8WWG1 115 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF582Q96NG8 517 aaPredicted RBP13.24□□□□□ -0.29
TRAF1-201ENST00000373887 CEPT1Q9Y6K0 416 aa13.24□□□□□ -0.29
TRAF1-201ENST00000373887 A0A0D9SG52 128 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 KCNK5O95279 499 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 CTRB1P17538 263 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 EDDM3BP56851 147 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 RAB11AP62491 216 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 TAZQ16635 292 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 SLC36A2Q495M3 483 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 CTRB2Q6GPI1 263 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 RFPL4BQ6ZWI9 263 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 CYS1Q717R9 158 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 MMP21Q8N119 569 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 MUL1Q969V5 352 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 OR2M2Q96R28 347 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 FAM103A1Q9BTL3 118 aaKnown RBP13.23□□□□□ -0.29
TRAF1-201ENST00000373887 OR52A5Q9H2C5 316 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 OR5H15A6NDH6 313 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 OR5H14A6NHG9 310 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 OR5H1A6NKK0 313 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 OR8U8P0C7N1 319 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 ACP2P11117 423 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 ITGAMP11215 1152 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 IMPA1P29218 277 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 Q7L0L9 218 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 OR13C9Q8NGT0 318 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 ACOT11Q8WXI4 607 aaPredicted RBP13.23□□□□□ -0.29
TRAF1-201ENST00000373887 DPF1Q92782 380 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 ITPKCQ96DU7 683 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 N4BP2Q86UW6 1770 aaPredicted RBP13.23□□□□□ -0.29
TRAF1-201ENST00000373887 LRP5LA4QPB2 252 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 FAM166BA8MTA8 275 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 DHRS4L1P0CG22 281 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 HSD17B7P56937 341 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 OPCMLQ14982 345 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 SMN1Q16637 294 aaKnown RBP13.23□□□□□ -0.29
TRAF1-201ENST00000373887 LHX8Q68G74 356 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 ENTHD1Q8IYW4 607 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 TFAP2CQ92754 450 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 PARP12Q9H0J9 701 aaKnown RBP13.23□□□□□ -0.29
TRAF1-201ENST00000373887 PADI1Q9ULC6 663 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 TMEM202A6NGA9 273 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 PTHP01270 115 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 TPOP07202 933 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 CD63P08962 238 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 DPP4P27487 766 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms