RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ADGRG3Q86Y34 549 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF679Q8IYX0 411 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 METTL27Q8N6F8 245 aaPredicted RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ZBTB8BQ8NAP8 495 aaPredicted RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 OR6K6Q8NGW6 343 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 OR5AK2Q8NH90 309 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 OTOSQ8NHW6 89 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ENKURQ8TC29 256 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ELP5Q8TE02 316 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 HPS1Q92902 700 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 TAAR8Q969N4 342 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 FOXRED1Q96CU9 486 aaPredicted RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 SGCZQ96LD1 299 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 CCDC74BQ96LY2 380 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 FAM210AQ96ND0 272 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 SDHCQ99643 169 aaPredicted RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 CRB3Q9BUF7 120 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 HCAR1Q9BXC0 346 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 DEFB126Q9BYW3 111 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF700Q9H0M5 742 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ABCG5Q9H222 651 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 MED20Q9H944 212 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 TCF7L1Q9HCS4 588 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 SLC22A11Q9NSA0 550 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ACOXLQ9NUZ1 547 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 RHBDL2Q9NX52 303 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 TAS2R8Q9NYW2 309 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 TAS2R5Q9NYW4 299 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 GNG8Q9UK08 70 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF346Q9UL40 294 aaKnown RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 YARS2Q9Y2Z4 477 aaKnown RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 B3GALT1Q9Y5Z6 326 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ADAMTS9Q9P2N4 1935 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 LY6G6EA0A0G2JKS1 128 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 TRBV5-5A0A0J9YX44 114 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 A0A1W2PQM1 296 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 HMX3A6NHT5 357 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 ACOD1A6NK06 481 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 GJE1A6NN92 205 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 A8MUA0 341 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 FAM25AB3EWG3 89 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 FAM25CB3EWG5 89 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 FAM25GB3EWG6 89 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 D6RAR5 112 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 FTCDNL1E5RQL4 147 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 GPR171O14626 319 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 SCGNO76038 276 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 TFP02787 698 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 ISG15P05161 165 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 CSF3P09919 207 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 MST1P26927 711 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 DDOSTP39656 456 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 SLC3A1Q07837 685 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 DNASE1L3Q13609 305 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 DOC2BQ14184 412 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 NNATQ16517 81 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 NDUFA5Q16718 116 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 COL28A1Q2UY09 1125 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 CCDC92Q53HC0 331 aaPredicted RBP7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 UBE2NLQ5JXB2 153 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 THEM4Q5T1C6 240 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 PWWP2BQ6NUJ5 590 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 C3orf33Q6P1S2 294 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 GUSBP11Q6P575 273 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 CNIH2Q6PI25 160 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF704Q6ZNC4 412 aaPredicted RBP7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 MEX3DQ86XN8 651 aaKnown RBP7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 CDH26Q8IXH8 852 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 UBQLNLQ8IYU4 475 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 LRRC17Q8N6Y2 441 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 CYB561A3Q8NBI2 242 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 IL17RDQ8NFM7 739 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF519Q8TB69 540 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 IFI44Q8TCB0 444 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 DUSP19Q8WTR2 217 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 PIGKQ92643 395 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 PTX4Q96A99 478 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 RFT1Q96AA3 541 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 INTS12Q96CB8 462 aaKnown RBP7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 ZMYND19Q96E35 227 aaPredicted RBP7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 KTI12Q96EK9 354 aaPredicted RBP7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 S100A16Q96FQ6 103 aaKnown RBP7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 Q96M85 177 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 RBP7Q96R05 134 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 CMKLR1Q99788 373 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 WACQ9BTA9 647 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 PTDSS2Q9BVG9 487 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 REPIN1Q9BWE0 567 aaKnown RBP7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 STRADBQ9C0K7 418 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 MOB1AQ9H8S9 216 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 RNF121Q9H920 327 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 PTTG3PQ9NZH4 202 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 PPP4R1LQ9P1A2 415 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 CKLFQ9UBR5 152 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 MUTYHQ9UIF7 546 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 B9D1Q9UPM9 204 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 FOXJ3Q9UPW0 622 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 MRPS18CQ9Y3D5 142 aaKnown RBP7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 ADAM18Q9Y3Q7 739 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms