RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 GJA4P35212 333 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 DNASE1L1P49184 302 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 ARF3P61204 181 aaPredicted RBP11.12□□□□□ -0.63
NCDN-202ENST00000373243 MAT1AQ00266 395 aaKnown RBP11.12□□□□□ -0.63
NCDN-202ENST00000373243 HTR4Q13639 388 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 TMEM91Q6ZNR0 172 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 KCTD9Q7L273 389 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 GALNTL5Q7Z4T8 443 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 FOXRED2Q8IWF2 684 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 PXT1Q8NFP0 134 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 OR56B4Q8NH76 319 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 DVL3Q92997 716 aaPredicted RBP11.12□□□□□ -0.63
NCDN-202ENST00000373243 ELF4Q99607 663 aaPredicted RBP11.12□□□□□ -0.63
NCDN-202ENST00000373243 TSPAN10Q9H1Z9 355 aaPredicted RBP11.12□□□□□ -0.63
NCDN-202ENST00000373243 TREM1Q9NP99 234 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 CLDND1Q9NY35 253 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 C13orf42A0A1B0GVH6 325 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 DCDC2BA2VCK2 349 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 CDC14CA4D256 554 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 GOSR2O14653 212 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 UBL3O95164 117 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 PAPLNO95428 1278 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 TBXA2RP21731 343 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 S100A11P31949 105 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 SKP2Q13309 424 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 GUCA2BQ16661 112 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 LILRA6Q6PI73 481 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 GSG1LQ6UXU4 331 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 TMEM64Q6YI46 380 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 ELP5Q8TE02 316 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 TMEM185BQ9H7F4 350 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 PPP1R3EQ9H7J1 279 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 DZANK1Q9NVP4 752 aa11.12□□□□□ -0.63
NCDN-202ENST00000373243 KDM4EB2RXH2 506 aaPredicted RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 RECKO95980 971 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 PRF1P14222 555 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 HIST1H1CP16403 213 aaKnown RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 NPR2P20594 1047 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 RPP30P78346 268 aaKnown RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 TRAM1Q15629 374 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 MLF2Q15773 248 aaPredicted RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 SLC35D2Q76EJ3 337 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 ZNF765Q7L2R6 523 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 PRSS41Q7RTY9 318 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 PUSL1Q8N0Z8 303 aaKnown RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 OR10H5Q8NGA6 315 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 RXFP4Q8TDU9 374 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 WDR34Q96EX3 536 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 Q96M85 177 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 TMEM68Q96MH6 324 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 ZFYVE21Q9BQ24 234 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 ZNF471Q9BX82 626 aaPredicted RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 CYSLTR2Q9NS75 346 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 CKLFQ9UBR5 152 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 ING1Q9UK53 422 aaPredicted RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 V9GY05 133 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 A0A1B0GTQ1 180 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 HCRTR2O43614 444 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 FGF17O60258 216 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 IFNA6P05013 189 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 NDUFS1P28331 727 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 AQP2P41181 271 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 PXNP49023 591 aaPredicted RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 ACTA2P62736 377 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 ACTG2P63267 376 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 RBM39Q14498 530 aaKnown RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 ITPRIPL2Q3MIP1 535 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 ZNF528Q3MIS6 628 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 OR5M10Q6IEU7 315 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 MAMDC2Q7Z304 686 aaPredicted RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 HSD17B13Q7Z5P4 300 aaPredicted RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 C5orf34Q96MH7 638 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 CMKLR1Q99788 373 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 TRPV4Q9HBA0 871 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 MED17Q9NVC6 651 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 ZNF346Q9UL40 294 aaKnown RBP11.11□□□□□ -0.63
NCDN-202ENST00000373243 C5orf51A6NDU8 294 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 TUBAL3A6NHL2 446 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 RENP00797 406 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 CXCL10P02778 98 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 HPXP02790 462 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 NQO2P16083 231 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 NRG3P56975 720 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 RPL13AP3Q6NVV1 102 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 LDLRAD3Q86YD5 345 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 OR5AK2Q8NH90 309 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 RSRP1Q9BUV0 290 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 C20orf85Q9H1P6 137 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 LHX9Q9NQ69 397 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 LHX6Q9UPM6 363 aa11.11□□□□□ -0.63
NCDN-202ENST00000373243 DSPPQ9NZW4 1301 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 MEIKINA0A087WXM9 373 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 KLF8O95600 359 aaPredicted RBP11.1□□□□□ -0.63
NCDN-202ENST00000373243 WNT1P04628 370 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 CD2P06729 351 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 CXCR1P25024 350 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 RAD52P43351 418 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 NUBP1P53384 320 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 UBE2IP63279 158 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms