RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 LPAR6P43657 344 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 NDUFA6P56556 154 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 FXYD6P3P58550 94 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 NAAAQ02083 359 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 NR0B2Q15466 257 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 PAPD4Q6PIY7 484 aaKnown RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 NDUFAF7Q7L592 441 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 ZNF280BQ86YH2 543 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 DNAJB3Q8WWF6 145 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 EDAQ92838 391 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 PPP1R16AQ96I34 528 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 KIRREL1Q96J84 757 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 SPON2Q9BUD6 331 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 C20orf24Q9BUV8 137 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 A0A1W2PPE2 198 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 CD3DP04234 171 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 RAB40ALP0C0E4 278 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 RAB4AP20338 218 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 C5AR1P21730 350 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 FAUP35544 74 aaKnown RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 RPP30P78346 268 aaKnown RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 AIMP2Q13155 320 aaKnown RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 ALG11Q2TAA5 492 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 ACTBL2Q562R1 376 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 PRPF38BQ5VTL8 546 aaKnown RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 UNQ9370/PRO34162Q6UXP9 181 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 HEPN1Q6WQI6 88 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 GID4Q8IVV7 300 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 OR2T33Q8NG76 320 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 OR4E2Q8NGC2 313 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 OR1J2Q8NGS2 313 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 OR56A3Q8NH54 315 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 PIGXQ8TBF5 258 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 RAB40AQ8WXH6 277 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 DVL3Q92997 716 aaPredicted RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 MIB2Q96AX9 1013 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 SMIM19Q96E16 107 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 SAMD8Q96LT4 415 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 CASD1Q96PB1 797 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 PDCD1LG2Q9BQ51 273 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 TTTY10Q9BZA0 68 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 GPR61Q9BZJ8 451 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 ADGRL4Q9HBW9 690 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 NOX4Q9NPH5 578 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 TEX13DA0A0J9YY54 714 aaPredicted RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 AGPAT2O15120 278 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 FBXO24O75426 580 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 IFNA17P01571 189 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 MELTFP08582 738 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 SELPP16109 830 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 GNG10P50151 68 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 GUCA2AQ02747 115 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 TWF1Q12792 350 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 DHRS2Q13268 280 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 BIKQ13323 160 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 TDGQ13569 410 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 KHDC3LQ587J8 217 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 YOD1Q5VVQ6 348 aaPredicted RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 NKAIN2Q5VXU1 208 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 MRM1Q6IN84 353 aaKnown RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 GDF6Q6KF10 455 aaPredicted RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 LCTLQ6UWM7 567 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 DTD1Q8TEA8 209 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 LCN9Q8WX39 176 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 BADQ92934 168 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 RRNAD1Q96FB5 475 aaKnown RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 MED8Q96G25 268 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 MICU1Q9BPX6 476 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 BCO1Q9HAY6 547 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 MYNNQ9NPC7 610 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 SIRT7Q9NRC8 400 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 INPP5EQ9NRR6 644 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 COMMD9Q9P000 198 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 NCDNQ9UBB6 729 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 NCOR1O75376 2440 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 A0A0B4J2A0 478 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 ZNF726A6NNF4 738 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 FRS3O43559 492 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 KDELR3O43731 214 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 THY1P04216 161 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 SBK2P0C263 348 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 CLUP10909 449 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 MPZP25189 248 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 ITPKBP27987 946 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 NDUFS1P28331 727 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 SULT1A1P50225 295 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 HTRA4P83105 476 aaPredicted RBP8.72□□□□□ -1.01
SF3A3-201ENST00000373019 FNDC3BQ53EP0 1204 aaKnown RBP8.72□□□□□ -1.01
SF3A3-201ENST00000373019 MESTQ5EB52 335 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 ZNF385CQ66K41 422 aaPredicted RBP8.72□□□□□ -1.01
SF3A3-201ENST00000373019 NXPE1Q8N323 547 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 LRRC18Q8N456 261 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 INO80EQ8NBZ0 244 aaPredicted RBP8.72□□□□□ -1.01
SF3A3-201ENST00000373019 RAB24Q969Q5 203 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 ADAM19Q9H013 955 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 SHPKQ9UHJ6 478 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 SZT2Q5T011 3432 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 PRUNE2Q8WUY3 3088 aa8.72□□□□□ -1.01
SF3A3-201ENST00000373019 MEIS3P1A6NDR6 274 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms