RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 RUNX3Q13761 415 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 ZNF776Q68DI1 518 aaPredicted RBP14.92□□□□□ -0.02
SDC4-201ENST00000372733 SLC6A19Q695T7 634 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 ZNF660Q6AZW8 331 aaPredicted RBP14.92□□□□□ -0.02
SDC4-201ENST00000372733 STK35Q8TDR2 534 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 TNFAIP8L1Q8WVP5 186 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 SPACA7Q96KW9 195 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 NKX3-1Q99801 234 aaPredicted RBP14.92□□□□□ -0.02
SDC4-201ENST00000372733 MRI1Q9BV20 369 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 ULBP3Q9BZM4 244 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 TMEM138Q9NPI0 162 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 IKZF2Q9UKS7 526 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 MOKQ9UQ07 419 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 TRBV5-5A0A0J9YX44 114 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 DCTN6O00399 190 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 TOR1AO14656 332 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 ABHD16AO95870 558 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 EGFP01133 1207 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 FAUP35544 74 aaKnown RBP14.92□□□□□ -0.02
SDC4-201ENST00000372733 RPS4XP62701 263 aaKnown RBP14.92□□□□□ -0.02
SDC4-201ENST00000372733 SORDQ00796 357 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 GPR18Q14330 331 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 NPSR1Q6W5P4 371 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 DNM1P46Q6ZS02 220 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 ZNF227Q86WZ6 799 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 LSM14AQ8ND56 463 aaKnown RBP14.92□□□□□ -0.02
SDC4-201ENST00000372733 OR51S1Q8NGJ8 323 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 CCDC74AQ96AQ1 378 aa14.92□□□□□ -0.02
SDC4-201ENST00000372733 ADAD1Q96M93 576 aaKnown RBP14.92□□□□□ -0.02
SDC4-201ENST00000372733 HEATR5AQ86XA9 2040 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 XRCC3O43542 346 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 PLRG1O43660 514 aaKnown RBP14.91□□□□□ -0.02
SDC4-201ENST00000372733 S1PR1P21453 382 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 FCARP24071 287 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 MAPK3P27361 379 aaPredicted RBP14.91□□□□□ -0.02
SDC4-201ENST00000372733 ZNHIT3Q15649 155 aaPredicted RBP14.91□□□□□ -0.02
SDC4-201ENST00000372733 C11orf88Q6PI97 169 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 ATRAIDQ6UW56 229 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 LRRN1Q6UXK5 716 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 SLC16A9Q7RTY1 509 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 BIVMQ86UB2 503 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 JAZF1Q86VZ6 243 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 ZNF454Q8N9F8 522 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 PATE1Q8WXA2 126 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 HOXB13Q92826 284 aaPredicted RBP14.91□□□□□ -0.02
SDC4-201ENST00000372733 DVL3Q92997 716 aaPredicted RBP14.91□□□□□ -0.02
SDC4-201ENST00000372733 LRIT1Q9P2V4 623 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 IGKV1D-42A0A075B6H8 117 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 HCRTR1O43613 425 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 RASGRP1O95267 797 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 CSTAP01040 98 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 RLN2P04090 185 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 CTSBP07858 339 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 GTF2F2P13984 249 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 CSRP1P21291 193 aaKnown RBP14.91□□□□□ -0.02
SDC4-201ENST00000372733 CALCRP30988 508 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 TSSK4Q6SA08 328 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 NAXDQ8IW45 347 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 C10orf53Q8N6V4 93 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 GATSQ8NAP1 163 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 RELL2Q8NC24 303 aaPredicted RBP14.91□□□□□ -0.02
SDC4-201ENST00000372733 RCBTB1Q8NDN9 531 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 OR51D1Q8NGF3 324 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 TMEM106AQ96A25 262 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 C3orf49Q96BT1 292 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 LMF2Q9BU23 707 aaKnown RBP14.91□□□□□ -0.02
SDC4-201ENST00000372733 CHST6Q9GZX3 395 aa14.91□□□□□ -0.02
SDC4-201ENST00000372733 SRA1Q9HD15 236 aaKnown RBP14.91□□□□□ -0.02
SDC4-201ENST00000372733 GGT3PA6NGU5 568 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 TACSTD2P09758 323 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 FBXO45P0C2W1 286 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 HYAL4Q2M3T9 481 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 OTPQ5XKR4 325 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 RNF44Q7L0R7 432 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 CDH26Q8IXH8 852 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 PDZD9Q8IXQ8 264 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 CSNK1A1LQ8N752 337 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 ZNF676Q8N7Q3 588 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 OR4C3Q8NH37 302 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 C15orf40Q8WUR7 153 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 EVA1AQ9H8M9 152 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 NPIPB9F8W1W9 429 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 TGFBR3LH3BV60 316 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 FOXS1O43638 330 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 TMEM127O75204 238 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 CTAG2O75638 210 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 CDC123O75794 336 aaPredicted RBP14.9□□□□□ -0.02
SDC4-201ENST00000372733 UBXN2BQ14CS0 331 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 ZNF141Q15928 474 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 DEFB110Q30KQ9 67 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 EXD3Q8N9H8 876 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 OR5M9Q8NGP3 310 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 OR6N1Q8NGY5 312 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 OR8S1Q8NH09 359 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 DUSP19Q8WTR2 217 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 MOGAT1Q96PD6 335 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 LDAHQ9H6V9 325 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 IL23AQ9NPF7 189 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 STEAP1Q9UHE8 339 aa14.9□□□□□ -0.02
SDC4-201ENST00000372733 MPDZO75970 2070 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms