RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 LACC1Q8IV20 430 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 A0A0D9SG52 128 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 OR6C65A6NJZ3 312 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 ZNF587BE7ETH6 402 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 NME2P22392 152 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 SERPINF1P36955 418 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 MTNR1BP49286 362 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 AARDQ4LEZ3 155 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 RFPL4BQ6ZWI9 263 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 KCTD12Q96CX2 325 aaKnown RBP20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 CDCP1Q9H5V8 836 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 DIMT1Q9UNQ2 313 aaKnown RBP20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 ZNF814B7Z6K7 855 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 NSA2O95478 260 aaKnown RBP20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 TRIM23P36406 574 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 RRADP55042 308 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 VN1R2Q8NFZ6 395 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 R3HDMLQ9H3Y0 253 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 ZNF728P0DKX0 622 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 RBMXL3Q8N7X1 1067 aaKnown RBP20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 PLPP7Q8NBV4 271 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 SMAP2Q8WU79 429 aaPredicted RBP20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 PDXPQ96GD0 296 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 TOR1AO14656 332 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 HSD17B6O14756 317 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 PSMB1P20618 241 aaKnown RBP20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 PPT1P50897 306 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 ACSM1Q08AH1 577 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 SAT2Q96F10 170 aaPredicted RBP20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 EDDM3BP56851 147 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 ZNF74Q16587 644 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 SLC22A24Q8N4F4 322 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 TLCD2A6NGC4 264 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 SLCO2B1O94956 709 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 LIM2P55344 173 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 ABHD17CQ6PCB6 329 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 CHTF18Q8WVB6 975 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 HRASLS5Q96KN8 279 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 ARPC5LQ9BPX5 153 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 LCMT2O60294 686 aaKnown RBP20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 NPPBP16860 134 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 TCN2P20062 427 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 BCKDHBP21953 392 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 TMEM52BQ4KMG9 183 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 TRIM61Q5EBN2 209 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 BATF2Q8N1L9 274 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 ZNF93P35789 620 aaPredicted RBP20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 MFSD12Q6NUT3 480 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 DCXRQ7Z4W1 244 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 CMIPQ8IY22 773 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 UBL7Q96S82 380 aaPredicted RBP20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 RNF32Q9H0A6 362 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 PHF1O43189 567 aaPredicted RBP20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 APEX1P27695 318 aaKnown RBP20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 OGFOD3Q6PK18 319 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 OR6V1Q8N148 313 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 ZFPM2Q8WW38 1151 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 FER1L6-AS2Q96M78 137 aa20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 MBNL1Q9NR56 388 aaKnown RBP20.43■□□□□ 0.86
TM9SF3-201ENST00000371142 C4BP0C0L5 1744 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 K7ESM1 405 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 OIP5O43482 229 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 GALEQ14376 348 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 TMEM217Q8N7C4 229 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 SLC16A11Q8NCK7 471 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 TMEM202A6NGA9 273 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 CLEC2LP0C7M8 214 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 PRKACAP17612 351 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 SLC10A1Q14973 349 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 SIAH3Q8IW03 269 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 TEX37Q96LM6 180 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 PIGLQ9Y2B2 252 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 KCNK2O95069 426 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 CLINT1Q14677 625 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 HENMT1Q5T8I9 393 aaKnown RBP20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 NXPE3Q969Y0 559 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 NXT1Q9UKK6 140 aaKnown RBP20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 OR52A1Q9UKL2 312 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 CTNSO60931 367 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 CCR6P51684 374 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 ZNF92Q03936 586 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 GLYATL3Q5SZD4 288 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 SYT13Q7L8C5 426 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 BSCL2Q96G97 398 aaPredicted RBP20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 UHRF2Q96PU4 802 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 ZNF576Q9H609 170 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 MMACHCQ9Y4U1 282 aa20.42■□□□□ 0.86
TM9SF3-201ENST00000371142 SMLR1H3BR10 107 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 BTN1A1Q13410 526 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 HABP2Q14520 560 aaPredicted RBP20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 OPCMLQ14982 345 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 FAM26DQ5JW98 314 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 S100A7AQ86SG5 101 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 CLEC2DQ9UHP7 191 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 SOCS7O14512 581 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 IGHV3-9P01782 118 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 RNF4P78317 190 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 TMEM221A6NGB7 291 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 GRPP07492 148 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 GSTP1P09211 210 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms