RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 RETREG3Q86VR2 466 aa11.34□□□□□ -0.59
RPF1-201ENST00000370654 C1orf159Q96HA4 380 aa11.34□□□□□ -0.59
RPF1-201ENST00000370654 CCDC28BQ9BUN5 200 aa11.34□□□□□ -0.59
RPF1-201ENST00000370654 C19orf24Q9BVV8 132 aa11.34□□□□□ -0.59
RPF1-201ENST00000370654 RAB1BQ9H0U4 201 aa11.34□□□□□ -0.59
RPF1-201ENST00000370654 LPAR3Q9UBY5 353 aa11.34□□□□□ -0.59
RPF1-201ENST00000370654 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.34□□□□□ -0.59
RPF1-201ENST00000370654 TESQ9UGI8 421 aaKnown RBP11.34□□□□□ -0.59
RPF1-201ENST00000370654 FZR1Q9UM11 496 aa11.34□□□□□ -0.59
RPF1-201ENST00000370654 C11orf98E9PRG8 122 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 TGDSO95455 350 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 TACSTD2P09758 323 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 TCN1P20061 433 aaPredicted RBP11.33□□□□□ -0.6
RPF1-201ENST00000370654 SLC6A2P23975 617 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 PCBP3P57721 371 aaKnown RBP11.33□□□□□ -0.6
RPF1-201ENST00000370654 PUDPQ08623 228 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 PMS2P3Q13401 168 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 MAD2L1BPQ15013 274 aaPredicted RBP11.33□□□□□ -0.6
RPF1-201ENST00000370654 AGBL2Q5U5Z8 902 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 C5orf46Q6UWT4 87 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 ZNF813Q6ZN06 617 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 ZNF627Q7L945 461 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 ARMC8Q8IUR7 673 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 ZNF584Q8IVC4 421 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 ZNF786Q8N393 782 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 LRRC17Q8N6Y2 441 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 OR6T1Q8NGN1 323 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 OR6S1Q8NH40 331 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 SNX18Q96RF0 628 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 MCHR1Q99705 422 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 ARHGDIGQ99819 225 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 SYT3Q9BQG1 590 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 TMEM27Q9HBJ8 222 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 MYOZ1Q9NP98 299 aaPredicted RBP11.33□□□□□ -0.6
RPF1-201ENST00000370654 MRPL39Q9NYK5 338 aaKnown RBP11.33□□□□□ -0.6
RPF1-201ENST00000370654 METRNQ9UJH8 293 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 USP22Q9UPT9 525 aa11.33□□□□□ -0.6
RPF1-201ENST00000370654 CPSF4LA6NMK7 179 aaKnown RBP11.32□□□□□ -0.6
RPF1-201ENST00000370654 WNT9BO14905 357 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 ERLIN1O75477 346 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 IFNGR1P15260 489 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 AHCYP23526 432 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 PAX7P23759 505 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 COL8A2P25067 703 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 ALDH3B1P43353 468 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 GIPRP48546 466 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 PTDSS1P48651 473 aaKnown RBP11.32□□□□□ -0.6
RPF1-201ENST00000370654 CRYBA2P53672 197 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 BIDP55957 195 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 MTPNP58546 118 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 RAB39AQ14964 217 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 GSG1Q2KHT4 349 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 ELFN2Q5R3F8 820 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 KRT73Q86Y46 540 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 SKA3Q8IX90 412 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 C10orf53Q8N6V4 93 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 SCAIQ8N9R8 606 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 HIPK4Q8NE63 616 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 LRRC8CQ8TDW0 803 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 UBASH3BQ8TF42 649 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 NEU4Q8WWR8 484 aaPredicted RBP11.32□□□□□ -0.6
RPF1-201ENST00000370654 MRPL24Q96A35 216 aaKnown RBP11.32□□□□□ -0.6
RPF1-201ENST00000370654 LRR1Q96L50 414 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 ANKRD27Q96NW4 1050 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 TMEM43Q9BTV4 400 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 SPATA5L1Q9BVQ7 753 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 ASPNQ9BXN1 380 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 ULBP2Q9BZM5 246 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 ZNF385DQ9H6B1 395 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 DYNLRB1Q9NP97 96 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 TAS2R5Q9NYW4 299 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 POFUT2Q9Y2G5 429 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 CORINQ9Y5Q5 1042 aa11.32□□□□□ -0.6
RPF1-201ENST00000370654 M0QX08 132 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 HPXP02790 462 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 CD247P20963 164 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 PPIBP23284 216 aaKnown RBP11.31□□□□□ -0.6
RPF1-201ENST00000370654 APEX1P27695 318 aaKnown RBP11.31□□□□□ -0.6
RPF1-201ENST00000370654 ATP4BP51164 291 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 NCALDP61601 193 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 CCNIQ14094 377 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 SQLEQ14534 574 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 MELKQ14680 651 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 FXNQ16595 210 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 ENTPD8Q5MY95 495 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 LRFN4Q6PJG9 635 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 PXKQ7Z7A4 578 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 PAQR4Q8N4S7 273 aaPredicted RBP11.31□□□□□ -0.6
RPF1-201ENST00000370654 OR6N1Q8NGY5 312 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 VANGL1Q8TAA9 524 aaPredicted RBP11.31□□□□□ -0.6
RPF1-201ENST00000370654 TMEM54Q969K7 222 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 YIPF5Q969M3 257 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 ZNF607Q96SK3 696 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 FOXB1Q99853 325 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 CMAHPQ9Y471 501 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 NOX1Q9Y5S8 564 aa11.31□□□□□ -0.6
RPF1-201ENST00000370654 PRORSD1PA6NEY8 169 aa11.3□□□□□ -0.6
RPF1-201ENST00000370654 ZNF726A6NNF4 738 aa11.3□□□□□ -0.6
RPF1-201ENST00000370654 KPNA4O00629 521 aaPredicted RBP11.3□□□□□ -0.6
RPF1-201ENST00000370654 AKAP8O43823 692 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms