RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 DCUN1D3Q8IWE4 304 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 CHDHQ8NE62 594 aaPredicted RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 OR52B6Q8NGF0 335 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 CNOT9Q92600 299 aaKnown RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 RPL3LQ92901 407 aaKnown RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 RPP25Q9BUL9 199 aaKnown RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 EFCAB11Q9BUY7 163 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 RIOK2Q9BVS4 552 aaKnown RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 TRMT61BQ9BVS5 477 aaKnown RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 YTHDF1Q9BYJ9 559 aaKnown RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 TM6SF2Q9BZW4 377 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 SAV1Q9H4B6 383 aaPredicted RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 STARD5Q9NSY2 213 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 ALKBH4Q9NXW9 302 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 C9orf170A2RU37 121 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 PRORSD1PA6NEY8 169 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 NEMP2A6NFY4 417 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 C4orf51C9J302 202 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 H6PDO95479 791 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 RPN2P04844 631 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 LINC00614P0C842 121 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 C1GALT1C1LP0DN25 315 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 CRYBB2P43320 205 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 ERFP50548 548 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 CHN2P52757 468 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 NXPH1P58417 271 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 HERV-K104P63124 156 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 DLK1P80370 383 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 FOXL1Q12952 345 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 COL28A1Q2UY09 1125 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 IFI44LQ53G44 452 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 SFT2D3Q587I9 215 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 UGT2A3Q6UWM9 527 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 KBTBD2Q8IY47 623 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 PUSL1Q8N0Z8 303 aaKnown RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 FGFRL1Q8N441 504 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 DNAJC22Q8N4W6 341 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 LRRC75AQ8NAA5 344 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 TMEM163Q8TC26 289 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 BLOC1S5Q8TDH9 187 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 ZFP90Q8TF47 636 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 EDARADDQ8WWZ3 215 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 LRRC58Q96CX6 371 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 WDYHV1Q96HA8 205 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 EFHD1Q9BUP0 239 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 APOOQ9BUR5 198 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 GABARAPL3Q9BY60 117 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 SPRY4Q9C004 299 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 TAS2R9Q9NYW1 312 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 FBXL3Q9UKT7 428 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 RAB26Q9ULW5 256 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 BTRCQ9Y297 605 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 GRIP1Q9Y3R0 1128 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 H3BN98 237 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 FAAHO00519 579 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 STK16O75716 305 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 ETHE1O95571 254 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 PDYNP01213 254 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 CD74P04233 296 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 STOMP27105 288 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 SLC6A1P30531 599 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 GKP32189 559 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 GPR143P51810 404 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 IST1P53990 364 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 SLC34A1Q06495 639 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 SCRN3Q0VDG4 424 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 PPP1R8Q12972 351 aaKnown RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 STX5Q13190 355 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 C1orf61Q13536 156 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 TPRG1LQ5T0D9 272 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 FAM182AQ5T1J6 154 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 MEDAGQ5VYS4 303 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 LAIR2Q6ISS4 152 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 C5orf46Q6UWT4 87 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 LINC00114Q6XXX2 140 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 ZCCHC23Q6ZST2 131 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 LINC00336Q6ZUF6 198 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 Q7L0L9 218 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 SSX9Q7RTT3 188 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 THOC6Q86W42 341 aaKnown RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 NAXDQ8IW45 347 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 MICU2Q8IYU8 434 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 EID3Q8N140 333 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 OR5AN1Q8NGI8 311 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 RPS4Y2Q8TD47 263 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 SCARB1Q8WTV0 552 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 AMDHD1Q96NU7 426 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 ZNF426Q9BUY5 554 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 SLITRK2Q9H156 845 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 ZCCHC4Q9H5U6 513 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 UBE2ZQ9H832 354 aaPredicted RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 C1GALT1Q9NS00 363 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 GPR173Q9NS66 373 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 DCAF13Q9NV06 445 aaKnown RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 C1orf109Q9NX04 203 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 NXT1Q9UKK6 140 aaKnown RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 MRPS18CQ9Y3D5 142 aaKnown RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 ATG4BQ9Y4P1 393 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 PPIAL4EA0A075B759 164 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 LOC105371242A0A075B767 164 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms