RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 A0A087WUU8 490 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 IGLV3-32A0A0A0MS00 114 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 A0A0B4J2E0 115 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 A0A1B0GX12 115 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 SH3PXD2BA1X283 911 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 TRAPPC13A5PLN9 417 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 MBD3L5A6NJ08 208 aaPredicted RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 G3V3Y1 287 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 H3BNH8 94 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 TP53I11O14683 189 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 ADAMDEC1O15204 470 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 FZD7O75084 574 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 GADD45GO95257 159 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 WDPCPO95876 746 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 ALPLP05186 524 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 LINGO3P0C6S8 592 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 PTNP21246 168 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 CBLP22681 906 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 POLR2IP36954 125 aaKnown RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 EIF2S3P41091 472 aaKnown RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 IDH2P48735 452 aaKnown RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 ALDH3A2P51648 485 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 CCL11P51671 97 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 TAS2R41P59536 307 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 PPP2R2BQ00005 443 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 FOXE3Q13461 319 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 CAMK2DQ13557 499 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 TUBA3CQ13748 450 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 MEP1AQ16819 746 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 MICAQ29983 383 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 COL28A1Q2UY09 1125 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 COLEC12Q5KU26 742 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 PRAMEF20Q5VT98 475 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 FAHD1Q6P587 224 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 TUBA3EQ6PEY2 450 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 ZNF613Q6PF04 617 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 LINC00696Q6ZRV3 163 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 USP51Q70EK9 711 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 ZNF550Q7Z398 422 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 RANBP3LQ86VV4 465 aaPredicted RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 MEX3DQ86XN8 651 aaKnown RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 ZNF440Q8IYI8 595 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 CADM2Q8N3J6 435 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 WDSUB1Q8N9V3 476 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 POC5Q8NA72 575 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 ZNF248Q8NDW4 579 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 OR10G2Q8NGC3 310 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 OR9Q2Q8NGE9 314 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 OR5W2Q8NH69 310 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 MOSPD2Q8NHP6 518 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 PAQR8Q8TEZ7 354 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 GIPC3Q8TF64 312 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 TMEM255BQ8WV15 326 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 SLC35B4Q969S0 331 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 ZNF597Q96LX8 424 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 SIGLEC12Q96PQ1 595 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 CCNL2Q96S94 520 aaPredicted RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 MBOAT4Q96T53 435 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 FEVQ99581 238 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 GPA33Q99795 319 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 NIPSNAP1Q9BPW8 284 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 GABARAPL1Q9H0R8 117 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 METTL7AQ9H8H3 244 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 EVA1AQ9H8M9 152 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 TMEM27Q9HBJ8 222 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 CPNE5Q9HCH3 593 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 DEPPQ9NTK1 212 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 HPF1Q9NWY4 346 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 QPCTLQ9NXS2 382 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 USE1Q9NZ43 259 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 SLC7A7Q9UM01 511 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 LRRC42Q9Y546 428 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 PRRC2CQ9Y520 2896 aaKnown RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 IGKV1D-42A0A075B6H8 117 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 PINLYPA6NC86 204 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 FAAHO00519 579 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 EFNA2O43921 213 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 CDC40O60508 579 aaKnown RBP eCLIP3.19□□□□□ -1.9
MCF2-202ENST00000370573 NEURL1O76050 574 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 CCNB2O95067 398 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 SNAP29O95721 258 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 SLPIP03973 132 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 IGFBP1P08833 259 aaPredicted RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 THRBP10828 461 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 GCSHP23434 173 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 ITPKBP27987 946 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 TMED10P49755 219 aaKnown RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 P2RX1P51575 399 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 CCR4P51679 360 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 UGT2B15P54855 530 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 SMIM11AP58511 58 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 ST3GAL3Q11203 375 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 TRAM2Q15035 370 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 QPRTQ15274 297 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 ZNF674Q2M3X9 581 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 NHSL2Q5HYW2 709 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 FGD3Q5JSP0 725 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 KRBOX4Q5JUW0 171 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 DCST1Q5T197 706 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 C6orf52Q5T4I8 152 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms