RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 RAB39AQ14964 217 aa13.11□□□□□ -0.31
SSR4-204ENST00000370087 MFSD13AQ14CX5 517 aa13.11□□□□□ -0.31
SSR4-204ENST00000370087 GLIPR1L2Q4G1C9 344 aa13.11□□□□□ -0.31
SSR4-204ENST00000370087 RNF220Q5VTB9 566 aa13.11□□□□□ -0.31
SSR4-204ENST00000370087 LRRC17Q8N6Y2 441 aa13.11□□□□□ -0.31
SSR4-204ENST00000370087 ZNF781Q8N8C0 355 aa13.11□□□□□ -0.31
SSR4-204ENST00000370087 TCP10LQ8TDR4 215 aa13.11□□□□□ -0.31
SSR4-204ENST00000370087 DDX28Q9NUL7 540 aaKnown RBP13.11□□□□□ -0.31
SSR4-204ENST00000370087 TAAR3PQ9P1P4 343 aa13.11□□□□□ -0.31
SSR4-204ENST00000370087 C17orf100A8MU93 164 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 MS4A18H0YCH9 400 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 BCHEP06276 602 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 ETFAP13804 333 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 GTF2E2P29084 291 aaKnown RBP13.1□□□□□ -0.31
SSR4-204ENST00000370087 S100A3P33764 101 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 UFM1P61960 85 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 RPS23P62266 143 aaKnown RBP13.1□□□□□ -0.31
SSR4-204ENST00000370087 GALK2Q01415 458 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 NKPD1Q17RQ9 610 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 MS4A18Q3C1V0 323 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 NHLRC1Q6VVB1 395 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 ZNF627Q7L945 461 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 LRRC34Q8IZ02 419 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 VPS37AQ8NEZ2 397 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 RAB39BQ96DA2 213 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 TXNDC15Q96J42 360 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 ZNF48Q96MX3 618 aaPredicted RBP13.1□□□□□ -0.31
SSR4-204ENST00000370087 PANX1Q96RD7 426 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 RSPO3Q9BXY4 272 aaPredicted RBP13.1□□□□□ -0.31
SSR4-204ENST00000370087 OR51B6Q9H340 312 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 C7orf69Q9H7B7 122 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 VIPAS39Q9H9C1 493 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 MED29Q9NX70 200 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 WIPI2Q9Y4P8 454 aa13.1□□□□□ -0.31
SSR4-204ENST00000370087 AIM2O14862 343 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 TM9SF1O15321 606 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 BPGMP07738 259 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 ALDOCP09972 364 aaKnown RBP13.09□□□□□ -0.31
SSR4-204ENST00000370087 FAM157BP0CG42 384 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 ANPEPP15144 967 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 H2AFXP16104 143 aaPredicted RBP13.09□□□□□ -0.31
SSR4-204ENST00000370087 RAB1AP62820 205 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 LCN2P80188 198 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 ZNF621Q6ZSS3 439 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 COMTD1Q86VU5 262 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 BCL6BQ8N143 479 aaPredicted RBP13.09□□□□□ -0.31
SSR4-204ENST00000370087 SLC38A5Q8WUX1 472 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 C20orf27Q9GZN8 174 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 KCNK9Q9NPC2 374 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 HINT3Q9NQE9 182 aaKnown RBP13.09□□□□□ -0.31
SSR4-204ENST00000370087 KLHL14Q9P2G3 628 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 P2RX2Q9UBL9 471 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 SLC7A8Q9UHI5 535 aa13.09□□□□□ -0.31
SSR4-204ENST00000370087 ZNF346Q9UL40 294 aaKnown RBP13.09□□□□□ -0.31
SSR4-204ENST00000370087 NOTCH1P46531 2555 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 IGHV1-69-2A0A0G2JMI3 117 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 RAB36O95755 333 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 CCL2P13500 99 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 PRTN3P24158 256 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 HTR2AP28223 471 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 RBMXP38159 391 aaKnown RBP13.08□□□□□ -0.32
SSR4-204ENST00000370087 CRYBB2P43320 205 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 CLNS1AP54105 237 aaKnown RBP13.08□□□□□ -0.32
SSR4-204ENST00000370087 DPY19L1Q2PZI1 675 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 TMEM255AQ5JRV8 349 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 RGS7BPQ6MZT1 257 aaPredicted RBP13.08□□□□□ -0.32
SSR4-204ENST00000370087 C6orf89Q6UWU4 347 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 USP51Q70EK9 711 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 H1FNTQ75WM6 255 aaPredicted RBP13.08□□□□□ -0.32
SSR4-204ENST00000370087 DOK3Q7L591 496 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 SKA3Q8IX90 412 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 MGARPQ8TDB4 240 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 SPATA9Q9BWV2 254 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 NTN4Q9HB63 628 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 ZNF69Q9UC07 566 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 POFUT2Q9Y2G5 429 aa13.08□□□□□ -0.32
SSR4-204ENST00000370087 IGLV3-9A0A075B6K5 115 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 LOC102725191A0A1B0GVB3 256 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 TYROBPO43914 113 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 ANXA11P50995 505 aaKnown RBP13.07□□□□□ -0.32
SSR4-204ENST00000370087 TXNL4AP83876 142 aaKnown RBP13.07□□□□□ -0.32
SSR4-204ENST00000370087 GLO1Q04760 184 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 CAMK2DQ13557 499 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 GTDC1Q4AE62 458 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 TNFAIP8L3Q5GJ75 292 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 KLF17Q5JT82 389 aaPredicted RBP13.07□□□□□ -0.32
SSR4-204ENST00000370087 FAM69AQ5T7M9 428 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 UEVLDQ8IX04 471 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 TRIML2Q8N7C3 387 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 DEFB108BQ8NET1 73 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 TMEM19Q96HH6 336 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 FOXB1Q99853 325 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 ULBP2Q9BZM5 246 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 TMBIM4Q9HC24 238 aa13.07□□□□□ -0.32
SSR4-204ENST00000370087 CLDN25C9JDP6 229 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 LRRN3E7EW58 273 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 AKAP8O43823 692 aaKnown RBP13.06□□□□□ -0.32
SSR4-204ENST00000370087 UBL3O95164 117 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 ZNF250P15622 560 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 MAKP20794 623 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms