RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ZNF540Q8NDQ6 660 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 IPCEF1Q8WWN9 437 aaPredicted RBP10.99□□□□□ -0.65
TUBE1-202ENST00000368662 ASB10Q8WXI3 467 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 OTULINQ96BN8 352 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF845Q96IR2 970 aaPredicted RBP10.99□□□□□ -0.65
TUBE1-202ENST00000368662 PRRG4Q9BZD6 226 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 CCNB1IP1Q9NPC3 277 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 DNAJC27Q9NZQ0 273 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 LUZP4Q9P127 313 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF175Q9Y473 711 aa10.99□□□□□ -0.65
TUBE1-202ENST00000368662 SPENQ96T58 3664 aaKnown RBP10.98□□□□□ -0.65
TUBE1-202ENST00000368662 A0A1B0GTH9 108 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 IRGMA1A4Y4 181 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 PRSS37A4D1T9 235 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 SLC22A31A6NKX4 558 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 CLCA1A8K7I4 914 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 CENPBD1B2RD01 187 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 NR2C1P13056 603 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 CDKN2AP42771 156 aaKnown RBP10.98□□□□□ -0.65
TUBE1-202ENST00000368662 CDH11P55287 796 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 PON3Q15166 354 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 RNPS1Q15287 305 aaKnown RBP10.98□□□□□ -0.65
TUBE1-202ENST00000368662 SMN1Q16637 294 aaKnown RBP10.98□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF324BQ6AW86 544 aaPredicted RBP10.98□□□□□ -0.65
TUBE1-202ENST00000368662 NHLRC1Q6VVB1 395 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 CREB3L2Q70SY1 520 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 EXD3Q8N9H8 876 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 OR9K2Q8NGE7 335 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 OR6X1Q8NH79 312 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 FNDC8Q8TC99 324 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 ZPLD1Q8TCW7 415 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 RNF128Q8TEB7 428 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 FAR1Q8WVX9 515 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 PTP4A1Q93096 173 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 SLC25A44Q96H78 314 aaPredicted RBP10.98□□□□□ -0.65
TUBE1-202ENST00000368662 DDOQ99489 341 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 MED29Q9NX70 200 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 CNOT2Q9NZN8 540 aaKnown RBP10.98□□□□□ -0.65
TUBE1-202ENST00000368662 VSX1Q9NZR4 365 aaPredicted RBP10.98□□□□□ -0.65
TUBE1-202ENST00000368662 KLHL9Q9P2J3 617 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 KLHL13Q9P2N7 655 aa10.98□□□□□ -0.65
TUBE1-202ENST00000368662 EFCAB10A6NFE3 127 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 TRIM64A6NGJ6 449 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 FAM183AA6NL82 134 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF726A6NNF4 738 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 GPR171O14626 319 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 XPNPEP2O43895 674 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 MRPS14O60783 128 aaKnown RBP10.97□□□□□ -0.65
TUBE1-202ENST00000368662 RAMP1O60894 148 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 SMNDC1O75940 238 aaKnown RBP eCLIP10.97□□□□□ -0.65
TUBE1-202ENST00000368662 IGHG1P01857 330 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 EEF1B2P24534 225 aaKnown RBP10.97□□□□□ -0.65
TUBE1-202ENST00000368662 HTR1FP30939 366 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 SLC25A1P53007 311 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 BIDP55957 195 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 RASGEF1BQ0VAM2 473 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 MELKQ14680 651 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 SLC35D3Q5M8T2 416 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 EEF1A1P5Q5VTE0 462 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 MEPCEQ7L2J0 689 aaKnown RBP10.97□□□□□ -0.65
TUBE1-202ENST00000368662 CYB561A3Q8NBI2 242 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 OR2T4Q8NH00 348 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 ROBO4Q8WZ75 1007 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 ALG12Q9BV10 488 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 NMNAT2Q9BZQ4 307 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 EMC3Q9P0I2 261 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 TNFRSF10DQ9UBN6 386 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 WARS2Q9UGM6 360 aaKnown RBP10.97□□□□□ -0.65
TUBE1-202ENST00000368662 PSORS1C1Q9UIG5 152 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 OR6C68A6NDL8 312 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF716A6NP11 495 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 AHRRA9YTQ3 701 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 DBTP11182 482 aaKnown RBP10.97□□□□□ -0.65
TUBE1-202ENST00000368662 PIPP12273 146 aaPredicted RBP10.97□□□□□ -0.65
TUBE1-202ENST00000368662 KLK2P20151 261 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 CENPAP49450 140 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 NUDT6P53370 316 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 SLC35A2P78381 396 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 KLHL22Q53GT1 634 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 LCN1P1Q5VSP4 162 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 NIPAL3Q6P499 406 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 BCDIN3DQ7Z5W3 292 aaKnown RBP10.97□□□□□ -0.65
TUBE1-202ENST00000368662 CISD2Q8N5K1 135 aaKnown RBP10.97□□□□□ -0.65
TUBE1-202ENST00000368662 MYDGFQ969H8 173 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 TXNDC15Q96J42 360 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 KCNK17Q96T54 332 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 TUBA1CQ9BQE3 449 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 DUSP21Q9H596 190 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 RNF122Q9H9V4 155 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 GP6Q9HCN6 339 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 RPRD1BQ9NQG5 326 aaKnown RBP10.97□□□□□ -0.65
TUBE1-202ENST00000368662 MOKQ9UQ07 419 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 RCE1Q9Y256 329 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 KIAA1549Q9HCM3 1950 aa10.97□□□□□ -0.65
TUBE1-202ENST00000368662 IGKV3D-15A0A087WSY6 115 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 SLC35F4A4IF30 521 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 PTGES3LE9PB15 166 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 CRABP1P29762 137 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 SLC15A1P46059 708 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 MTNR1AP48039 350 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms