RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 DND1Q8IYX4 353 aaKnown RBP7.89□□□□□ -1.15
TPM3-213ENST00000368545 CMTM4Q8IZR5 234 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 OR11G2Q8NGC1 345 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 SPATA3Q8NHX4 192 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 ZNF563Q8TA94 476 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 RNF138Q8WVD3 245 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 HGDQ93099 445 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 TUBA1CQ9BQE3 449 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 TMEM43Q9BTV4 400 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 GPR87Q9BY21 358 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 DUSP21Q9H596 190 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 EGLN3Q9H6Z9 239 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 LIN28AQ9H9Z2 209 aaKnown RBP7.89□□□□□ -1.15
TPM3-213ENST00000368545 ZBTB20Q9HC78 741 aaPredicted RBP7.89□□□□□ -1.15
TPM3-213ENST00000368545 MED17Q9NVC6 651 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 ZNF226Q9NYT6 803 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 DMXL2Q8TDJ6 3036 aa7.89□□□□□ -1.15
TPM3-213ENST00000368545 PTGES3LE9PB15 166 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 MASP2O00187 686 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 CDC42EP2O14613 210 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 RGS10O43665 173 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 CDC40O60508 579 aaKnown RBP eCLIP7.88□□□□□ -1.15
TPM3-213ENST00000368545 HCN1O60741 890 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 NTN1O95631 604 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 SAGP10523 405 aaPredicted RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 JUNBP17275 347 aaPredicted RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 BMP7P18075 431 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 SLC1A3P43003 542 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 SLC9A3P48764 834 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 PCYT1AP49585 367 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 C17orf67Q0P5P2 114 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 NTRK2Q16620 822 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 SMN1Q16637 294 aaKnown RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 TMEM44Q2T9K0 475 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 FAM69AQ5T7M9 428 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 CBLN3Q6UW01 205 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 KCTD8Q6ZWB6 473 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 PRSS48Q7RTY5 328 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 GPR141Q7Z602 305 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 PXKQ7Z7A4 578 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 ATG4DQ86TL0 474 aaPredicted RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 MARCH3Q86UD3 253 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 CYP4Z2PQ8N1L4 340 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 OR2T33Q8NG76 320 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 OR5W2Q8NH69 310 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 B4GALNT2Q8NHY0 566 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 TBC1D15Q8TC07 691 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 MYDGFQ969H8 173 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 KIAA1143Q96AT1 154 aaPredicted RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 C5orf34Q96MH7 638 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 PLA2G12AQ9BZM1 189 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 DSN1Q9H410 356 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 UNKLQ9H9P5 680 aaKnown RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 MEPEQ9NQ76 525 aaPredicted RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 C20orf141Q9NUB4 165 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 PAK1IP1Q9NWT1 392 aaPredicted RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 CNOT2Q9NZN8 540 aaKnown RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 ICAM5Q9UMF0 924 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 FARSAQ9Y285 508 aaKnown RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 PMS2P1A4D2B8 440 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 EFCAB10A6NFE3 127 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 SNTNA6NMZ2 147 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 EFCAB9A8MZ26 197 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 STMND1H3BQB6 276 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 KPNA4O00629 521 aaPredicted RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 SCO2O43819 266 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 OR2J2O76002 312 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 HPP00738 406 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 IGFBP1P08833 259 aaPredicted RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 MAKP20794 623 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 FBXW4P57775 412 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 CLRN1P58418 232 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 RPP30P78346 268 aaKnown RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 CRYZQ08257 329 aaKnown RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 FHL3Q13643 280 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 PGGHGQ32M88 737 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 FAM69BQ5VUD6 431 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 DGAT2L7PQ6IED9 249 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 SPARTQ8N0X7 666 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 LINC00482Q8N8I6 264 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 OR8D4Q8NGM9 314 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 OR14K1Q8NGZ2 314 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 SPACA9Q96E40 222 aaPredicted RBP7.88□□□□□ -1.15
TPM3-213ENST00000368545 ARSGQ96EG1 525 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 SGTBQ96EQ0 304 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 RASL10BQ96S79 203 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 GPHA2Q96T91 129 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 COPS4Q9BT78 406 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 TSSK6Q9BXA6 273 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 OR10A2Q9H208 303 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 SLC6A15Q9H2J7 730 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 OR52D1Q9H346 318 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 SDHAF3Q9NRP4 125 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 FKBP14Q9NWM8 211 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 TVP23BQ9NYZ1 205 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 FOXJ2Q9P0K8 574 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 PSORS1C1Q9UIG5 152 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 BAIAP2Q9UQB8 552 aa7.88□□□□□ -1.15
TPM3-213ENST00000368545 SIGLEC7Q9Y286 467 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms