RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 OR7A10O76100 309 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 OR6A2O95222 327 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 IGKV3-15P01624 115 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 BIDP55957 195 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 UBE2NP61088 152 aaKnown RBP16.5■□□□□ 0.23
CKS1B-203ENST00000368439 LSM11P83369 360 aaKnown RBP eCLIP16.5■□□□□ 0.23
CKS1B-203ENST00000368439 MYPOPQ86VE0 399 aaPredicted RBP16.5■□□□□ 0.23
CKS1B-203ENST00000368439 OR6X1Q8NH79 312 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 LZICQ8WZA0 190 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 TMEM54Q969K7 222 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 COX4I2Q96KJ9 171 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 ADAD1Q96M93 576 aaKnown RBP16.5■□□□□ 0.23
CKS1B-203ENST00000368439 HS6ST2Q96MM7 605 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 SMR3AQ99954 134 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 SEC61A2Q9H9S3 476 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 FAIMQ9NVQ4 179 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 POU2F3Q9UKI9 436 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 MOKQ9UQ07 419 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 TRIM64A6NGJ6 449 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 TRIM64BA6NI03 449 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 ZNF726A6NNF4 738 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 J3KTA2 159 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 NDUFAB1O14561 156 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 RNF13O43567 381 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 SEC14L2O76054 403 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 PRSS23O95084 383 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 UMPSP11172 480 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 FUT1P19526 365 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 RPL18Q07020 188 aaKnown RBP16.49■□□□□ 0.23
CKS1B-203ENST00000368439 ST3GAL3Q11203 375 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 ARFGEF3Q5TH69 2177 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 AGAP6Q5VW22 663 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 ZNF544Q6NX49 715 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 NANOGNBQ7Z5D8 188 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 TSEN54Q7Z6J9 526 aaKnown RBP16.49■□□□□ 0.23
CKS1B-203ENST00000368439 DEPDC4Q8N2C3 294 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 SGTBQ96EQ0 304 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 KCTD14Q9BQ13 255 aaPredicted RBP16.49■□□□□ 0.23
CKS1B-203ENST00000368439 B3GNT2Q9NY97 397 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 ATP23Q9Y6H3 246 aa16.49■□□□□ 0.23
CKS1B-203ENST00000368439 ZANQ9Y493 2812 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 GSTA4O15217 222 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 PIP5K1CO60331 668 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 NDUFS7O75251 213 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 ZNF682O95780 498 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 SERPINA1P01009 418 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 IGHV4-39P01824 125 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 HIST1H2ABP04908 130 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 CELA3BP08861 270 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 INHBBP09529 407 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 CECR9P0C854 216 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 CBR1P16152 277 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 NCK1P16333 377 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 YAP1P46937 504 aaKnown RBP16.48■□□□□ 0.23
CKS1B-203ENST00000368439 MELKQ14680 651 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 IFI44LQ53G44 452 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 HIST3H2AQ7L7L0 130 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 OFCC1Q8IZS5 231 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 MUC15Q8N387 334 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 OR6N1Q8NGY5 312 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 GEMIN6Q8WXD5 167 aaKnown RBP16.48■□□□□ 0.23
CKS1B-203ENST00000368439 HIST1H2ACQ93077 130 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 GTPBP3Q969Y2 492 aaKnown RBP16.48■□□□□ 0.23
CKS1B-203ENST00000368439 TRMT61AQ96FX7 289 aaKnown RBP16.48■□□□□ 0.23
CKS1B-203ENST00000368439 HSH2DQ96JZ2 352 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 KATNB1Q9BVA0 655 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 ULBP2Q9BZM5 246 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 SPAG4Q9NPE6 437 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 B3GAT2Q9NPZ5 323 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 CBLN4Q9NTU7 201 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 ZNF224Q9NZL3 707 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 MED31Q9Y3C7 131 aa16.48■□□□□ 0.23
CKS1B-203ENST00000368439 BLOC1S5-TXNDC5H3BN57 136 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 H7C1Q1 480 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 IFNW1P05000 195 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 PGA4P0DJD7 388 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 PGA3P0DJD8 388 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 CALCRP30988 508 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 CSNK1A1P48729 337 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 FABP6P51161 128 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 RIPPLY3P57055 190 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 NAAAQ02083 359 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 HIST3H3Q16695 136 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 LRFN4Q6PJG9 635 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 DNM1P46Q6ZS02 220 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 BIVMQ86UB2 503 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 CCDC36Q8IYA8 594 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 RBM15BQ8NDT2 890 aaKnown RBP16.47■□□□□ 0.23
CKS1B-203ENST00000368439 MOSPD2Q8NHP6 518 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 SLC25A44Q96H78 314 aaPredicted RBP16.47■□□□□ 0.23
CKS1B-203ENST00000368439 ZNF75AQ96N20 296 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 SEPHS2Q99611 448 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 BDH2Q9BUT1 245 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 NOX3Q9HBY0 568 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 MOV10Q9HCE1 1003 aaKnown RBP16.47■□□□□ 0.23
CKS1B-203ENST00000368439 GLTPQ9NZD2 209 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 RHCGQ9UBD6 479 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 GDF2Q9UK05 429 aaPredicted RBP16.47■□□□□ 0.23
CKS1B-203ENST00000368439 ARL2BPQ9Y2Y0 163 aa16.47■□□□□ 0.23
CKS1B-203ENST00000368439 F13BP05160 661 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms