RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TOE1Q96GM8 510 aaKnown RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 MS4A3Q96HJ5 214 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 GAS2L1Q99501 681 aaPredicted RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 LRRC61Q9BV99 259 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 TSPAN10Q9H1Z9 355 aaPredicted RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 GPN1Q9HCN4 374 aaPredicted RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 NKIRAS2Q9NYR9 191 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 CD207Q9UJ71 328 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 TUBAL3A6NHL2 446 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 ANXA2P2A6NMY6 339 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 PSMD9O00233 223 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 GLSO94925 669 aaPredicted RBP12.98□□□□□ -0.33
CD48-201ENST00000368045 RPP14O95059 124 aaKnown RBP12.98□□□□□ -0.33
CD48-201ENST00000368045 CRYZL1O95825 349 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 ANXA2P07355 339 aaKnown RBP12.98□□□□□ -0.33
CD48-201ENST00000368045 GIPP09681 153 aaPredicted RBP12.98□□□□□ -0.33
CD48-201ENST00000368045 GLULP15104 373 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 IFNGR1P15260 489 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 ADRA2CP18825 462 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 ALOX5APP20292 161 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 RORAP35398 523 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 VEGFCP49767 419 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 ZNF81P51508 661 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 CCR4P51679 360 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 MAZP56270 477 aaKnown RBP12.98□□□□□ -0.33
CD48-201ENST00000368045 SLC37A1P57057 533 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 DHODHQ02127 395 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 EGR4Q05215 589 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 SNTA1Q13424 505 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 CLLU1Q5K131 121 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 FDX2Q6P4F2 183 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 APOOLQ6UXV4 268 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 HDDC2Q7Z4H3 204 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 GATSQ8NAP1 163 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 OR2T35Q8NGX2 323 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 OR2G2Q8NGZ5 317 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 ORAI1Q96D31 301 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 TSSK2Q96PF2 358 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 TSPAN32Q96QS1 320 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 OR10A4Q9H209 315 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 METTL17Q9H7H0 456 aaPredicted RBP12.98□□□□□ -0.33
CD48-201ENST00000368045 NOX3Q9HBY0 568 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 EIF3KQ9UBQ5 218 aaKnown RBP12.98□□□□□ -0.33
CD48-201ENST00000368045 EPHA6Q9UF33 1036 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 UBQLN2Q9UHD9 624 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 STEAP1Q9UHE8 339 aa12.98□□□□□ -0.33
CD48-201ENST00000368045 A0A1W2PPC4 97 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 TTLL8A6PVC2 850 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 ARPC1BO15143 372 aaKnown RBP12.97□□□□□ -0.33
CD48-201ENST00000368045 SHOXO15266 292 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 NDUFB6O95139 128 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 SYPP08247 313 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 CENPAP49450 140 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 BLVRAP53004 296 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 DCAF7P61962 342 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 LTBQ06643 244 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 MESTQ5EB52 335 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 OR8H3Q8N146 312 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 ZNF676Q8N7Q3 588 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 UXS1Q8NBZ7 420 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 PTPMT1Q8WUK0 201 aaPredicted RBP12.97□□□□□ -0.33
CD48-201ENST00000368045 ASB17Q8WXJ9 295 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 INTS14Q96SY0 518 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 SRA1Q9HD15 236 aaKnown RBP12.97□□□□□ -0.33
CD48-201ENST00000368045 TAS2R8Q9NYW2 309 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 MRPL15Q9P015 296 aaKnown RBP12.97□□□□□ -0.33
CD48-201ENST00000368045 KLK11Q9UBX7 282 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 IKZF2Q9UKS7 526 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 FLVCR2Q9UPI3 526 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 SCN2AQ99250 2005 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 TMEM150CB9EJG8 249 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 XRCC3O43542 346 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 ICMTO60725 284 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 F13BP05160 661 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 MST1P26927 711 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 CD1CP29017 333 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 TACR3P29371 465 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 SELENOPP49908 381 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 CLDN12P56749 244 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 RAP2BP61225 183 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 ELOCQ15369 112 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 TMEM255AQ5JRV8 349 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 CBLN3Q6UW01 205 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 TMPRSS12Q86WS5 348 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 SERPINA12Q8IW75 414 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 ELMOD2Q8IZ81 293 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 OR6N2Q8NGY6 317 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 ZNF563Q8TA94 476 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 KTI12Q96EK9 354 aaPredicted RBP12.97□□□□□ -0.33
CD48-201ENST00000368045 OR1F2PQ96R84 312 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 LMF1Q96S06 567 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 NXF5Q9H1B4 397 aaKnown RBP12.97□□□□□ -0.33
CD48-201ENST00000368045 PDE7BQ9NP56 450 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 LANCL2Q9NS86 450 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 CYP8B1Q9UNU6 501 aa12.97□□□□□ -0.33
CD48-201ENST00000368045 TRAV36DV7A0A075B6V5 113 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 TEX51A0A1B0GUA7 166 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 A0A1W2PQD3 144 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 OR2W5A6NFC9 320 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 TLCD2A6NGC4 264 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms