RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TUBB1Q9H4B7 451 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 DENND2DQ9H6A0 471 aaPredicted RBP12.31□□□□□ -0.44
VAMP4-202ENST00000367740 EGFL7Q9UHF1 273 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 NPTNQ9Y639 398 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 DOCK11Q5JSL3 2073 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 NOTCH3Q9UM47 2321 aa12.31□□□□□ -0.44
VAMP4-202ENST00000367740 CFAP73A6NFT4 308 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 A8MVM7 634 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 FTCDNL1E5RQL4 147 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 F5H0A9 414 aaPredicted RBP12.3□□□□□ -0.44
VAMP4-202ENST00000367740 H3BQF6 201 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 CFLARO15519 480 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 NPIPB7O75200 414 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 IGHV1-46P01743 117 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 MELTFP08582 738 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 TFPTP0C1Z6 253 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 OR12D1P0DN82 309 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 NEFHP12036 1026 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 RPL3P39023 403 aaKnown RBP12.3□□□□□ -0.44
VAMP4-202ENST00000367740 ZNF81P51508 661 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 AQP5P55064 265 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 PTGR1Q14914 329 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 MFSD13AQ14CX5 517 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 CHI3L2Q15782 390 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 GALNTL6Q49A17 601 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 CCBE1Q6UXH8 406 aaPredicted RBP12.3□□□□□ -0.44
VAMP4-202ENST00000367740 RNF130Q86XS8 419 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 ZNF519Q8TB69 540 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 MIPOL1Q8TD10 442 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 PPP1R14AQ96A00 147 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 NOX4Q9NPH5 578 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 NECAP2Q9NVZ3 263 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 OR5V1Q9UGF6 321 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 ZNF180Q9UJW8 692 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 FBXL3Q9UKT7 428 aa12.3□□□□□ -0.44
VAMP4-202ENST00000367740 RNF103-CHMP3A0A140T963 221 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 PRAMEF27A3QJZ7 478 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 SHOX2O60902 331 aaPredicted RBP12.29□□□□□ -0.44
VAMP4-202ENST00000367740 UBL3O95164 117 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 SERPINA5P05154 406 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 LCKP06239 509 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 SBK2P0C263 348 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 PAFAH1B1P43034 410 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 RBBP4Q09028 425 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 SPRNQ5BIV9 151 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 KLHL36Q8N4N3 616 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 SPICQ8N5J4 248 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 POU5F2Q8N7G0 328 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 FGFBP3Q8TAT2 258 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 XAGE5Q8WWM1 108 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 DYRK2Q92630 601 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 COQ8BQ96D53 544 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 WWC2-AS2Q96NR7 200 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 ATAD3AQ9NVI7 634 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 POMT1Q9Y6A1 747 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 SAR1BQ9Y6B6 198 aa12.29□□□□□ -0.44
VAMP4-202ENST00000367740 SPRY3O43610 288 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 IGHV3-13P01766 116 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 MT-ND5P03915 603 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 LINC00032P0C843 101 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 PATE4P0C8F1 98 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 CCL2P13500 99 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 UQCRBP14927 111 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 CAMK2DQ13557 499 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 GSTA3Q16772 222 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 TMEM155Q4W5P6 130 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 OXLD1Q5BKU9 147 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 TMEM255AQ5JRV8 349 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 ATAD3BQ5T9A4 648 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 CARD17Q5XLA6 110 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 TNFAIP8L2Q6P589 184 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-202ENST00000367740 RNF165Q6ZSG1 346 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 DDIASQ8IXT1 998 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 C20orf196Q8IYI0 205 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 KRTCAP2Q8N6L1 136 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 NATD1Q8N6N6 113 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 SLC30A7Q8NEW0 376 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 MFSD8Q8NHS3 518 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 GEMIN6Q8WXD5 167 aaKnown RBP12.28□□□□□ -0.44
VAMP4-202ENST00000367740 C11orf40Q8WZ69 217 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 SLC47A1Q96FL8 570 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 OXGR1Q96P68 337 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 DCLRE1CQ96SD1 692 aaKnown RBP12.28□□□□□ -0.44
VAMP4-202ENST00000367740 FOXB1Q99853 325 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 PTDSS2Q9BVG9 487 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 GIMAP2Q9UG22 337 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 IL20RAQ9UHF4 553 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-202ENST00000367740 UTP11Q9Y3A2 253 aaKnown RBP12.28□□□□□ -0.44
VAMP4-202ENST00000367740 FIS1Q9Y3D6 152 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 SACSQ9NZJ4 4579 aa12.28□□□□□ -0.44
VAMP4-202ENST00000367740 ZSCAN5BA6NJL1 495 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 POC1B-GALNT4F8VUJ3 575 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 G3V2L1 256 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 GPR137BO60478 399 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 AHSA1O95433 338 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 AGR2O95994 175 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 DRD4P21917 467 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 MMP15P51511 669 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 C2orf54Q08AI8 447 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms