RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 MIB2Q96AX9 1013 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 SORCS2Q96PQ0 1159 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 OR51J1Q9H342 316 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 PELI2Q9HAT8 420 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 RANGRFQ9HD47 186 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-206ENST00000367253 HIF1ANQ9NWT6 349 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 BET1LQ9NYM9 111 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 MYOCOSA0A1B0GUC4 107 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 C2orf78A6NCI8 922 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 I6L893 689 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF701M0R085 212 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-206ENST00000367253 GOSR1O95249 250 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ACSM4P0C7M7 580 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 PMCHP20382 165 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 CPT2P23786 658 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 CAV2P51636 162 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 KIAA1024LP59773 190 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 RANP62826 216 aaKnown RBP8.01□□□□□ -1.13
SYNE1-206ENST00000367253 SLC35A1P78382 337 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 TFF2Q03403 129 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 RELQ04864 619 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-206ENST00000367253 INPP5JQ15735 1006 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-206ENST00000367253 HAGHQ16775 308 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 NKAIN1Q4KMZ8 207 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 DPY19L2P1Q6NXN4 242 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ANGPTL5Q86XS5 388 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 XYLT1Q86Y38 959 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 BOD1L2Q8IYS8 172 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 CNIH3Q8TBE1 160 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 KREMEN1Q96MU8 473 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 TRIB3Q96RU7 358 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 GPR87Q9BY21 358 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 C1orf198Q9H425 327 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 OPN4Q9UHM6 478 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 DHDHQ9UQ10 334 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 SPAARA0A1B0GVQ0 90 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 CCSO14618 274 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 CDS2O95674 445 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 KLK1P06870 262 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 SULT1A3P0DMM9 295 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 SULT1A4P0DMN0 295 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 OPRM1P35372 400 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 PTGIRP43119 386 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 RPS27AP62979 156 aaKnown RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 UBA52P62987 128 aaKnown RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 PTPRRQ15256 657 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 OR2B11Q5JQS5 317 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 LDB1Q86U70 411 aaPredicted RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 RTP4Q96DX8 246 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 ASB16Q96NS5 453 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 GSX2Q9BZM3 304 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 OR10A5Q9H207 317 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 OR10A2Q9H208 303 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 PURGQ9UJV8 347 aaKnown RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 DIRAS1O95057 198 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 RGRP47804 291 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 ATP5IP56385 69 aaPredicted RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 GINS1Q14691 196 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 CSRP2Q16527 193 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 ATP6V1FQ16864 119 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 ZXDCQ2QGD7 858 aaPredicted RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 TTC32Q5I0X7 151 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 LPCAT3Q6P1A2 487 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 TMEM71Q6P5X7 295 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF761Q86XN6 746 aaPredicted RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 JOSD2Q8TAC2 188 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 KISS1RQ969F8 398 aaPredicted RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 MBOAT4Q96T53 435 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 SLC46A2Q9BY10 475 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 ULBP2Q9BZM5 246 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 MS4A7Q9GZW8 240 aaPredicted RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF442Q9H7R0 627 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 GJD2Q9UKL4 321 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 TCRBV7S2A1N4TA0A589 114 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 ACAA1P09110 424 aaPredicted RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 DPP4P27487 766 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 PBX1P40424 430 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 OPRL1P41146 370 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 THBS3P49746 956 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 SHC2P98077 582 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 RBM39Q14498 530 aaKnown RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 AGERQ15109 404 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 PLA1AQ53H76 456 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 FAHD2BQ6P2I3 314 aaPredicted RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 DPPA4Q7L190 304 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 CDC20BQ86Y33 519 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 C19orf47Q8N9M1 422 aaKnown RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 OR8J1Q8NGP2 316 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 OR56A3Q8NH54 315 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 FAHD2AQ96GK7 314 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 FN3KRPQ9HA64 309 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 RDH14Q9HBH5 336 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 HSPE1-MOB4S4R3N1 261 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 A3GALT2U3KPV4 340 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 A0A1W2PPC4 97 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 PLRG1O43660 514 aaKnown RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 SIX6O95475 246 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 C4BPAP04003 597 aaKnown RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 BCHEP06276 602 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 DLX5P56178 289 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms