RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 WNT7BP56706 349 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 ZNF691Q5VV52 312 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 RFPL4BQ6ZWI9 263 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 DPPA2Q7Z7J5 298 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 RPS19BP1Q86WX3 136 aaKnown RBP14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 LACC1Q8IV20 430 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 MAML2Q8IZL2 1156 aaPredicted RBP14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 KIR3DX1Q9H7L2 352 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 ADAM12O43184 909 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 RAB5CP51148 216 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.51□□□□□ -0.092e-6■■■□□ 14.6
NUCKS1-201ENST00000367142 FRMPD2BQ6IN97 320 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 OR1S2Q8NGQ3 325 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 OR1N1Q8NGS0 311 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 HPSE2Q8WWQ2 592 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 ZNF582Q96NG8 517 aaPredicted RBP14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 PHF7Q9BWX1 381 aaPredicted RBP14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 MUTYHQ9UIF7 546 aa14.51□□□□□ -0.09
NUCKS1-201ENST00000367142 MT-ATP6P00846 226 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 SARAFQ96BY9 339 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 RNF170Q96K19 258 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 FAM96BQ9Y3D0 163 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 M0QZ24 198 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 PHF1O43189 567 aaPredicted RBP14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 FBXO24O75426 580 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 IMPA1P29218 277 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 IDO2Q6ZQW0 420 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 ZNF546Q86UE3 836 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 SMAP2Q8WU79 429 aaPredicted RBP14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 UBTD2Q8WUN7 234 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 OR1E3Q8WZA6 343 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 PCDHGA5Q9Y5G8 931 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 TRBV4-1A0A0J9YWV2 114 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 SORDQ00796 357 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 PNPLA1Q8N8W4 532 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 GTF2H4Q92759 462 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 GGHQ92820 318 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 TRIB1Q96RU8 372 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 DEFB127Q9H1M4 99 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 PUS1Q9Y606 427 aaKnown RBP eCLIP14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 PIK3C2AO00443 1686 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 TMEM64Q6YI46 380 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 NKAIN3Q8N8D7 197 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 ZDHHC16Q969W1 377 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 SLC35E1Q96K37 410 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 OR2M2Q96R28 347 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 FIZ1Q96SL8 496 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 MBOAT4Q96T53 435 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 PLEKHF2Q9H8W4 249 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 OR52A1Q9UKL2 312 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 EIF4E2O60573 245 aaKnown RBP14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 APOBEC1P41238 236 aaKnown RBP14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 NKX2-5P52952 324 aaPredicted RBP14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 SNTB1Q13884 538 aaKnown RBP14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 MS4A8Q9BY19 250 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 ARV1Q9H2C2 271 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 CCL26Q9Y258 94 aa14.5□□□□□ -0.09
NUCKS1-201ENST00000367142 LINC01553A4QN01 128 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 RAB27BO00194 218 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 ATXN1LP0C7T5 689 aaKnown RBP14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 RPL35P42766 123 aaKnown RBP14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 C1orf140Q5VVS0 124 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 C18orf63Q68DL7 685 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 WDR88Q6ZMY6 472 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 PIGTQ969N2 578 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 ABCD4O14678 606 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 ZNF93P35789 620 aaPredicted RBP14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 AGFG1P52594 562 aaKnown RBP14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 MS4A2Q01362 244 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 ARHGAP11BQ3KRB8 267 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 DESI1Q6ICB0 168 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 OR10X1Q8NGY0 326 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 CHTF18Q8WVB6 975 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 NMNAT3Q96T66 252 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 RIMS4Q9H426 269 aaPredicted RBP14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 MED20Q9H944 212 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 ACOD1A6NK06 481 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 METTL15P1P0C7V9 234 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 GABRA5P31644 462 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 BCL7AQ4VC05 210 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 H1FNTQ75WM6 255 aaPredicted RBP14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 FAM185AQ8N0U4 392 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 SLC35A4Q96G79 324 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 SUCNR1Q9BXA5 334 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 SELPLGQ14242 412 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 C1orf87Q8N0U7 546 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 SEMA6DQ8NFY4 1073 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 OR51A2Q8NGJ7 313 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 ATOH8Q96SQ7 321 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 TRGV8A0A0C4DH27 118 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 TPMTP51580 245 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 TLE1Q04724 770 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 MARCH8Q5T0T0 291 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 H2BFWTQ7Z2G1 175 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 KCTD12Q96CX2 325 aaKnown RBP14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 ARPC5LQ9BPX5 153 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 MFRPQ9BY79 579 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms