RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 MBD2Q9UBB5 411 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 PLEKHA6Q9Y2H5 1048 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 KIF26AQ9ULI4 1882 aaPredicted RBP17.96■□□□□ 0.47
TRIM58-201ENST00000366481 MPTX1A8MV57 137 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 ZNF705EA8MWA4 302 aaPredicted RBP17.96■□□□□ 0.47
TRIM58-201ENST00000366481 UBBP0CG47 229 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 UBCP0CG48 685 aaKnown RBP17.96■□□□□ 0.47
TRIM58-201ENST00000366481 SPP1P10451 314 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 RPS27AP62979 156 aaKnown RBP17.96■□□□□ 0.47
TRIM58-201ENST00000366481 UBA52P62987 128 aaKnown RBP17.96■□□□□ 0.47
TRIM58-201ENST00000366481 OR6K3Q8NGY3 331 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 SDF2Q99470 211 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 SLC19A3Q9BZV2 496 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 TSPAN10Q9H1Z9 355 aaPredicted RBP17.96■□□□□ 0.47
TRIM58-201ENST00000366481 MED31Q9Y3C7 131 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 PTPRSQ13332 1948 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 BHLHE40O14503 412 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 AQP8O94778 261 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 S100A6P06703 90 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 ANXA2P07355 339 aaKnown RBP17.96■□□□□ 0.47
TRIM58-201ENST00000366481 IL9P15248 144 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 ZNF136P52737 540 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 POLR2GP62487 172 aaKnown RBP eCLIP17.96■□□□□ 0.47
TRIM58-201ENST00000366481 OR1Q1Q15612 314 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 FBXO42Q6P3S6 717 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 GLB1L2Q8IW92 636 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 TNFRSF13CQ96RJ3 184 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 ST6GALNAC2Q9UJ37 374 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 PCDHB10Q9UN67 800 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 FOXJ3Q9UPW0 622 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 TRAPPC13A5PLN9 417 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 TMEM200CA6NKL6 621 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 RNGTTO60942 597 aaKnown RBP17.95■□□□□ 0.46
TRIM58-201ENST00000366481 PSMD4P55036 377 aaKnown RBP17.95■□□□□ 0.46
TRIM58-201ENST00000366481 GUCA2AQ02747 115 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 DEFB110Q30KQ9 67 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 LDLRAD3Q86YD5 345 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 YAF2Q8IY57 180 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 LNX2Q8N448 690 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 OR1S2Q8NGQ3 325 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 SFXN5Q8TD22 340 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 PAQR8Q8TEZ7 354 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 APOOQ9BUR5 198 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 CLDND1Q9NY35 253 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 OR5V1Q9UGF6 321 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 CCSO14618 274 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 FARS2O95363 451 aaKnown RBP17.95■□□□□ 0.46
TRIM58-201ENST00000366481 FBXO45P0C2W1 286 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 PAN3Q58A45 887 aaKnown RBP17.95■□□□□ 0.46
TRIM58-201ENST00000366481 ASPGQ86U10 573 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 COX18Q8N8Q8 333 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 OR4K14Q8NGD5 310 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 OR1E3Q8WZA6 343 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 HSPA12BQ96MM6 686 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 VRK1Q99986 396 aaPredicted RBP17.95■□□□□ 0.46
TRIM58-201ENST00000366481 PRSS27Q9BQR3 290 aa17.95■□□□□ 0.46
TRIM58-201ENST00000366481 OR6C68A6NDL8 312 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 FADS1O60427 444 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 CTSBP07858 339 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 CPMP14384 443 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 PRRT3Q5FWE3 981 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 H3F3CQ6NXT2 135 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 FBXO46Q6PJ61 603 aaPredicted RBP17.94■□□□□ 0.46
TRIM58-201ENST00000366481 NOP16Q9Y3C1 178 aaKnown RBP17.94■□□□□ 0.46
TRIM58-201ENST00000366481 TRAV18A0A075B6X5 111 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 CALCRP30988 508 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 GABRA3P34903 492 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 RORAP35398 523 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 PPM1FP49593 454 aaPredicted RBP17.94■□□□□ 0.46
TRIM58-201ENST00000366481 OR2W3Q7Z3T1 314 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 EIF4E3Q8N5X7 224 aaKnown RBP17.94■□□□□ 0.46
TRIM58-201ENST00000366481 MFSD9Q8NBP5 474 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 OR1M1Q8NGA1 313 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 CNN2Q99439 309 aaKnown RBP17.94■□□□□ 0.46
TRIM58-201ENST00000366481 IL21RQ9HBE5 538 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 NIT2Q9NQR4 276 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 FGF17O60258 216 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 ADAM11O75078 769 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 MGMTP16455 207 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 PPP1CAP62136 330 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 PON3Q15166 354 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 SCGB2B2Q4G0G5 96 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 MAMSTRQ6ZN01 415 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 SLC35F2Q8IXU6 374 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 OR4N2Q8NGD1 307 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 MS4A4EQ96PG1 132 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 NKX3-1Q99801 234 aaPredicted RBP17.94■□□□□ 0.46
TRIM58-201ENST00000366481 JAM3Q9BX67 310 aa17.94■□□□□ 0.46
TRIM58-201ENST00000366481 MTHFD2LQ9H903 347 aaPredicted RBP17.94■□□□□ 0.46
TRIM58-201ENST00000366481 ZNF275Q9NSD4 429 aaPredicted RBP17.94■□□□□ 0.46
TRIM58-201ENST00000366481 NUP210Q8TEM1 1887 aaPredicted RBP17.93■□□□□ 0.46
TRIM58-201ENST00000366481 CT62P0C5K7 136 aa17.93■□□□□ 0.46
TRIM58-201ENST00000366481 TYRP1P17643 537 aa17.93■□□□□ 0.46
TRIM58-201ENST00000366481 PRKAR1BP31321 381 aa17.93■□□□□ 0.46
TRIM58-201ENST00000366481 TMEM71Q6P5X7 295 aa17.93■□□□□ 0.46
TRIM58-201ENST00000366481 TEX19Q8NA77 164 aa17.93■□□□□ 0.46
TRIM58-201ENST00000366481 TRPV4Q9HBA0 871 aa17.93■□□□□ 0.46
TRIM58-201ENST00000366481 RASL12Q9NYN1 266 aa17.93■□□□□ 0.46
TRIM58-201ENST00000366481 GTF2A1LQ9UNN4 478 aa17.93■□□□□ 0.46
TRIM58-201ENST00000366481 FARSAQ9Y285 508 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms