RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 GLYATL2Q8WU03 294 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 C7orf33Q8WU49 177 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 ANKRD49Q8WVL7 239 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 C8orf44Q96CB5 159 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 FAM122AQ96E09 287 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 NAF1Q96HR8 494 aaKnown RBP3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 PRRC1Q96M27 445 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 KCTD14Q9BQ13 255 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 RIOK2Q9BVS4 552 aaKnown RBP3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 ANKRD60Q9BZ19 345 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 ELOVL6Q9H5J4 265 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 FANCEQ9HB96 536 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 LYRM4Q9HD34 91 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 SH2D2AQ9NP31 389 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 IL26Q9NPH9 171 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 TUBG2Q9NRH3 451 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 MRPL22Q9NWU5 206 aaKnown RBP3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 CALYQ9NYX4 217 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 CLEC4EQ9ULY5 219 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 ASF1AQ9Y294 204 aa3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 ZNF256Q9Y2P7 627 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1339P-201ENST00000363574 RLFQ13129 1914 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 ERVV-1B6SEH8 477 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 MGRN1O60291 552 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 YWHAGP61981 247 aaKnown RBP eCLIP3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 KYAT1Q16773 422 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 KLHL40Q2TBA0 621 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 HIKESHIQ53FT3 197 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 GPR157Q5UAW9 335 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 ZNF620Q6ZNG0 422 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 RFLNAQ6ZTI6 216 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 TMEM179BQ7Z7N9 219 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 IQCKQ8N0W5 287 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 CEND1Q8N111 149 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 LIX1Q8N485 282 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 EID2Q8N6I1 236 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 GSDMAQ96QA5 445 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 RARRES2Q99969 163 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 NICN1Q9BSH3 213 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 POLR2J2Q9GZM3 115 aaKnown RBP3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 POLR2J3Q9H1A7 115 aaKnown RBP3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 MRPL47Q9HD33 250 aaKnown RBP3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 CCNB1IP1Q9NPC3 277 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 MMP24Q9Y5R2 645 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 CNTNAP1P78357 1384 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 THSD7BQ9C0I4 1608 aa3.33□□□□□ -1.88
RNU6-1339P-201ENST00000363574 PHF3Q92576 2039 aaKnown RBP3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 EPOPA6NHQ4 379 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 ZFP92A6NM28 416 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 NDUFAB1O14561 156 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 DYNC1I1O14576 645 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 MRPS12O15235 138 aaKnown RBP3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 HUS1O60921 280 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 CLPXO76031 633 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 GAS8-AS1O95177 125 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 CLIC3O95833 236 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 MYL2P10916 166 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 EIF2S2P20042 333 aaKnown RBP3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 BCKDHBP21953 392 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 FOXN2P32314 431 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 BTCP35070 178 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 SLC1A1P43005 524 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 CX3CR1P49238 355 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 SSR4P51571 173 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 APOC4P55056 127 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 EOGTQ5NDL2 527 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 PPM1LQ5SGD2 360 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 PLCXD3Q63HM9 321 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 MYPOPQ86VE0 399 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 MMAAQ8IVH4 418 aaKnown RBP3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 MICU2Q8IYU8 434 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 PDIK1LQ8N165 341 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 ZNF740Q8NDX6 193 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 RHEBL1Q8TAI7 183 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 SLC7A13Q8TCU3 470 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 GPX8Q8TED1 209 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 SGK3Q96BR1 496 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 ZNF707Q96C28 371 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 RPUSD4Q96CM3 377 aaKnown RBP3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 PLEKHF1Q96S99 279 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 RANBP3Q9H6Z4 567 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 TMEM165Q9HC07 324 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 EXD2Q9NVH0 621 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 CLCF1Q9UBD9 225 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 PEF1Q9UBV8 284 aaKnown RBP3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 LRRK1Q38SD2 2015 aa3.32□□□□□ -1.88
RNU6-1339P-201ENST00000363574 A0A0J9YXY3 114 aa3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 KBTBD11-OT1A0A1B0GTJ5 212 aa3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 CDC7O00311 574 aa3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 TNFSF11O14788 317 aa3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 PHOX2AO14813 284 aa3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 EEDO75530 441 aaKnown RBP3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 EIF3GO75821 320 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 ALDOBP05062 364 aa3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 COX7A1P24310 79 aa3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 HMOX2P30519 316 aa3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 FMO3P31513 532 aa3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 GPR6P46095 362 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 MRPL19P49406 292 aaKnown RBP3.31□□□□□ -1.88
RNU6-1339P-201ENST00000363574 SUB1P53999 127 aaKnown RBP eCLIP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms