RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 PFN1P07737 140 aaKnown RBP-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 H2BFMP0C1H6 154 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 CYLC1P35663 651 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 NCBP2P52298 156 aaKnown RBP eCLIP-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 HSPA2P54652 639 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 AQP6Q13520 282 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 PRPSAP1Q14558 356 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 SS18Q15532 418 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 BEND3Q5T5X7 828 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 GUSBP11Q6P575 273 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 LINC00173Q6ZV60 143 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 ZNF546Q86UE3 836 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 DHRSXQ8N5I4 330 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 MYLPFQ96A32 169 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 RNF145Q96MT1 663 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 TMEM59Q9BXS4 323 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 GABARAPL3Q9BY60 117 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 RAB34Q9BZG1 259 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 RAB17Q9H0T7 212 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 ATG10Q9H0Y0 220 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 CTSFQ9UBX1 484 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 COPS3Q9UNS2 423 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 PSG8Q9UQ74 426 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 COL4A1P02462 1669 aa-0.06□□□□□ -2.42
RNU6-238P-201ENST00000363313 IGLV10-54A0A075B6I4 117 aa-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 IGKV2-29A2NJV5 120 aaPredicted RBP-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 BTNL10A8MVZ5 291 aa-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 GAPDHP04406 335 aaKnown RBP-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 PSMB5P28074 263 aa-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 IDH2P48735 452 aaKnown RBP-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 SRP54P61011 504 aaKnown RBP-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 ERVK-25P63136 954 aa-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 RPS21P63220 83 aaKnown RBP-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 BIKQ13323 160 aa-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 MAD2L1BPQ15013 274 aaPredicted RBP-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 OR4S2Q8NH73 311 aa-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 DQX1Q8TE96 717 aaKnown RBP-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 SHC3Q92529 594 aa-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 DUS3LQ96G46 650 aaKnown RBP-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 RHOXF2Q9BQY4 288 aa-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 MRPL45Q9BRJ2 306 aaKnown RBP-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 NIPSNAP3BQ9BS92 247 aa-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 YAE1D1Q9NRH1 226 aa-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 PACSIN2Q9UNF0 486 aaPredicted RBP-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 ICE1Q9Y2F5 2266 aa-0.07□□□□□ -2.42
RNU6-238P-201ENST00000363313 MANBAO00462 879 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 KMOO15229 486 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 ZNF35P13682 527 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 POLR2EP19388 210 aaKnown RBP-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 TPSB2P20231 275 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 TBXA2RP21731 343 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 AQP2P41181 271 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 SYKP43405 635 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 SPP2Q13103 211 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 MORF4L2Q15014 288 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 TPSAB1Q15661 275 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 PGGHGQ32M88 737 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 OR2A2Q6IF42 318 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 TMPPEQ6ZT21 453 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 UTS2BQ765I0 119 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 ANKRD23Q86SG2 305 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 TMEM135Q86UB9 458 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 CBWD2Q8IUF1 395 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 OR5D13Q8NGL4 314 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 NANPQ8TBE9 248 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 ACTR6Q9GZN1 396 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 GBA3Q9H227 469 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 RNF167Q9H6Y7 350 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 UGT1A7Q9HAW7 530 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 UGT1A10Q9HAW8 530 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 UGT1A8Q9HAW9 530 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 LY9Q9HBG7 655 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 EXOSC4Q9NPD3 245 aaKnown RBP-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 ANO10Q9NW15 660 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 SEC14L3Q9UDX4 400 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 KCNN3Q9UGI6 736 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 PRR14LQ5THK1 2151 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 THADAQ6YHU6 1953 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 COL6A6A6NMZ7 2263 aa-0.08□□□□□ -2.42
RNU6-238P-201ENST00000363313 SDHAF1A6NFY7 115 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 LHBP01229 141 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 IGHG4P01861 327 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 HLA-DQB1P01920 261 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 LDHCP07864 332 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 ZNF688P0C7X2 276 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 CSRP1P21291 193 aaKnown RBP-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 MPV17P39210 176 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 CDKN2BP42772 138 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 CCR8P51685 355 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 AP3M2P53677 418 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 PKNOX1P55347 436 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 PYDC2Q56P42 97 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 OR2G6Q5TZ20 316 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 PLBD1Q6P4A8 553 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 NCCRP1Q6ZVX7 275 aaPredicted RBP-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 LHFPL3Q86UP9 236 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 GOT1L1Q8NHS2 421 aaPredicted RBP-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 GDAP1Q8TB36 358 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 CSPG4P5Q96PW8 444 aa-0.09□□□□□ -2.42
RNU6-238P-201ENST00000363313 RUFY1Q96T51 708 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms