RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PLET1Q6UQ28 207 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 SSX6Q7RTT6 188 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF761Q86XN6 746 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-202ENST00000360642 CYB561A3Q8NBI2 242 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 SMAP2Q8WU79 429 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-202ENST00000360642 UPRTQ96BW1 309 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 FYTTD1Q96QD9 318 aaKnown RBP6.64□□□□□ -1.35
CLCN3-202ENST00000360642 TTYH2Q9BSA4 534 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 DDX28Q9NUL7 540 aaKnown RBP6.64□□□□□ -1.35
CLCN3-202ENST00000360642 EXTL2Q9UBQ6 330 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 ST6GALNAC2Q9UJ37 374 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 ICAM5Q9UMF0 924 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 DTX4Q9Y2E6 619 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 NOX1Q9Y5S8 564 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 A0A0G2JMP0 313 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 A0A0X1KG70 313 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 OR10H2O60403 315 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 TRIM3O75382 744 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-202ENST00000360642 SLC43A1O75387 559 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 IGLV3-19P01714 112 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 EIF4EP06730 217 aaKnown RBP6.64□□□□□ -1.35
CLCN3-202ENST00000360642 PSKH1P11801 424 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 NPR2P20594 1047 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 SLC6A6P31641 620 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 OR10A3P58181 314 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 RPS7P62081 194 aaKnown RBP6.64□□□□□ -1.35
CLCN3-202ENST00000360642 ACTC1P68032 377 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 ACTA1P68133 377 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 FZD2Q14332 565 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 GGTLC2Q14390 218 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 C19orf54Q5BKX5 351 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF542PQ5EBM4 170 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 SFXN4Q6P4A7 337 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 ARHGAP11AQ6P4F7 1023 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 ULK3Q6PHR2 472 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 NPSR1Q6W5P4 371 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 NOXA1Q86UR1 476 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 OOSP2Q86WS3 158 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 TCTE3Q8IZS6 198 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 SLC44A3Q8N4M1 653 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 Q8NFD4 153 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 OR4M2Q8NGB6 313 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 OR5J2Q8NH18 312 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 RIT1Q92963 219 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 DDOQ99489 341 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 CCDC3Q9BQI4 270 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 ZCCHC4Q9H5U6 513 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 JKAMPQ9P055 326 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 KLHL21Q9UJP4 597 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 MMP17Q9ULZ9 603 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 VPS13AQ96RL7 3174 aa6.64□□□□□ -1.35
CLCN3-202ENST00000360642 FAM25AB3EWG3 89 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 FAM25CB3EWG5 89 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 FAM25GB3EWG6 89 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 J3QLW9 94 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 OGG1O15527 345 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 CTNSO60931 367 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 GYPBP06028 91 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF19P17023 458 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 RBMS1P29558 406 aaKnown RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 HHEXQ03014 270 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 SLC3A1Q07837 685 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 CRYZQ08257 329 aaKnown RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 ZSWIM7Q19AV6 140 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 ARHGAP40Q5TG30 622 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 TIGD3Q6B0B8 471 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 KIRREL2Q6UWL6 708 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF550Q7Z398 422 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 CEACAM19Q7Z692 300 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 MS4A15Q8N5U1 240 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 RFLNBQ8N5W9 214 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 OR4M1Q8NGD0 313 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 MISP3Q96FF7 219 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 C8orf33Q9H7E9 229 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 SLC28A3Q9HAS3 691 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 NLKQ9UBE8 527 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 ALG5Q9Y673 324 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 A0A087X0M5 115 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 FAM240BA0A1B0GVZ2 78 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 A0A1B0GX30 115 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 LANCL1O43813 399 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 IFNGP01579 166 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 TFP02787 698 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 CT45A8P0DMV1 189 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 CT45A9P0DMV2 189 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 HIST1H1CP16403 213 aaKnown RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 S100A1P23297 94 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 SLC6A1P30531 599 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 ZNHIT3Q15649 155 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 DEFB110Q30KQ9 67 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 CT45A2Q5DJT8 189 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 PAMR1Q6UXH9 720 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 TAF8Q7Z7C8 310 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 OR52E2Q8NGJ4 325 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 GHSRQ92847 366 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 RBM18Q96H35 190 aaKnown RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 CD207Q9UJ71 328 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 RASD1Q9Y272 281 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 A0A087WUJ7 227 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 A0A0A6YYC8 382 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms