RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SLC15A4Q8N697 577 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 SLC35A4Q96G79 324 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 CSNK1G3Q9Y6M4 447 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ZNF93P35789 620 aaPredicted RBP8.98□□□□□ -0.97
CUX1-203ENST00000360264 BAXQ07812 192 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 HIST2H3AQ71DI3 136 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ADAM19Q9H013 955 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ECM29Q5VYK3 1845 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 NAGAP17050 411 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 CRMP1Q14194 572 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 VSX1Q9NZR4 365 aaPredicted RBP8.97□□□□□ -0.97
CUX1-203ENST00000360264 PGAP2Q9UHJ9 254 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 PTGDR2Q9Y5Y4 395 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 SYT5O00445 386 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 PTGESO14684 152 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 CR2P20023 1033 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 ZNF91Q05481 1191 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 CDONQ4KMG0 1287 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.97□□□□□ -0.971e-8■■■■□ 26.3
CUX1-203ENST00000360264 NEURL3Q96EH8 262 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 CNTNAP3Q9BZ76 1288 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 GMPR2Q9P2T1 348 aaKnown RBP8.97□□□□□ -0.97
CUX1-203ENST00000360264 FIGNL2A6NMB9 653 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 ARR3P36575 388 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 RFX2P48378 723 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 BIDP55957 195 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 APOOLQ6UXV4 268 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 KANSL1Q7Z3B3 1105 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 DND1Q8IYX4 353 aaKnown RBP8.97□□□□□ -0.97
CUX1-203ENST00000360264 TEX19Q8NA77 164 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 DOK4Q8TEW6 326 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 SLC22A12Q96S37 553 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 NPIPA5A0A0B4J1W7 369 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 HPNP05981 417 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 GABRB3P28472 473 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 BLVRBP30043 206 aaPredicted RBP8.97□□□□□ -0.97
CUX1-203ENST00000360264 CD68P34810 354 aaPredicted RBP8.97□□□□□ -0.97
CUX1-203ENST00000360264 TXNL4BQ9NX01 149 aaKnown RBP8.97□□□□□ -0.97
CUX1-203ENST00000360264 COQ3Q9NZJ6 369 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 SH2D7A6NKC9 451 aaPredicted RBP8.97□□□□□ -0.97
CUX1-203ENST00000360264 OR1D4P47884 311 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 EPHA5P54756 1037 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 HES1Q14469 280 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 C3orf58Q8NDZ4 430 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 TECTBQ96PL2 329 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 PADI1Q9ULC6 663 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 BET1O15155 118 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 PLRG1O43660 514 aaKnown RBP8.97□□□□□ -0.97
CUX1-203ENST00000360264 ZNF728P0DKX0 622 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 IMPA1P29218 277 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 MGAT3Q09327 533 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 GPR45Q9Y5Y3 372 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 YY2O15391 372 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 UTS2O95399 124 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 RPL13AP40429 203 aaKnown RBP8.97□□□□□ -0.97
CUX1-203ENST00000360264 SIRPAP78324 504 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 MRPL2Q5T653 305 aaKnown RBP8.97□□□□□ -0.97
CUX1-203ENST00000360264 OR10X1Q8NGY0 326 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 FAM117AQ9C073 453 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 LAMP3Q9UQV4 416 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 NME4O00746 187 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 STT3AP46977 705 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 ZNF691Q5VV52 312 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 METTL4Q8N3J2 472 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 SEC22CQ9BRL7 303 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 CASP8AP2Q9UKL3 1982 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 YIF1BQ5BJH7 314 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 CBLL1Q75N03 491 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 PRR22Q8IZ63 422 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 PRSS35Q8N3Z0 413 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 ZDHHC5Q9C0B5 715 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 SH2D1BO14796 132 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 APOA2P02652 100 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 PCDHGA5Q9Y5G8 931 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 IGKV6D-21A0A0A0MT36 114 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 A0A1B0GTW7 788 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 OR10J4P0C629 311 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 CST5P28325 142 aaPredicted RBP8.97□□□□□ -0.97
CUX1-203ENST00000360264 APOBEC1P41238 236 aaKnown RBP8.97□□□□□ -0.97
CUX1-203ENST00000360264 OR6M1Q8NGM8 313 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 OR6K3Q8NGY3 331 aa8.97□□□□□ -0.97
CUX1-203ENST00000360264 PIGFQ07326 219 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 H2BFWTQ7Z2G1 175 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 FAM122AQ96E09 287 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 POLDIP2Q9Y2S7 368 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 TAF1P21675 1872 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 AQP9O43315 295 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 KHDC1LQ5JSQ8 128 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 SLC35D3Q5M8T2 416 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 PAQR8Q8TEZ7 354 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 SLC35E1Q96K37 410 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 ACKR4Q9NPB9 350 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 NSA2O95478 260 aaKnown RBP8.96□□□□□ -0.97
CUX1-203ENST00000360264 ARAFP10398 606 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 HBA1P69905 142 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 GPR19Q15760 415 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 ZNF628Q5EBL2 1059 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 ZNF486Q96H40 463 aaPredicted RBP8.96□□□□□ -0.97
CUX1-203ENST00000360264 NDFIP1Q9BT67 221 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 PSMB10P40306 273 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms