RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ARHGAP19Q14CB8 494 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 CMTM8Q8IZV2 173 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 SLC43A2Q8N370 569 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 TRMT61BQ9BVS5 477 aaKnown RBP13.63□□□□□ -0.23
UBAP1-202ENST00000359544 OR2AG1Q9H205 316 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 RNF122Q9H9V4 155 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 MED31Q9Y3C7 131 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 GXYLT2A0PJZ3 443 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 OR2AT4A6NND4 320 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 UBE2CO00762 179 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 RPN2P04844 631 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 ITGB2P05107 769 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 CKMP06732 381 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 SLC6A6P31641 620 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 HSD17B2P37059 387 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 NPBWR1P48145 328 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 SSBP1Q04837 148 aaKnown RBP13.62□□□□□ -0.23
UBAP1-202ENST00000359544 SMCO1Q147U7 214 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 PEA15Q15121 130 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 VWA2Q5GFL6 755 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 STPG1Q5TH74 334 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 WDR88Q6ZMY6 472 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 SLC35F3Q8IY50 421 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 RPS4Y2Q8TD47 263 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 PRAP1Q96NZ9 151 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 TLNRD1Q9H1K6 362 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 PRSS16Q9NQE7 514 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 NCDNQ9UBB6 729 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 ICAM5Q9UMF0 924 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 WDR45Q9Y484 360 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 A0A1B0GTI1 187 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 TSPAN11A1L157 253 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 LRRC72A6NJI9 287 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 F5H0A9 414 aaPredicted RBP13.62□□□□□ -0.23
UBAP1-202ENST00000359544 THBS1P07996 1170 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 GKN3PP0CG01 181 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 ERGP11308 486 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 CSF2RBP32927 897 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 PSMB10P40306 273 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 OR1Q1Q15612 314 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 ZNF750Q32MQ0 723 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 TMEM35AQ53FP2 167 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 TMEM71Q6P5X7 295 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 STAC2Q6ZMT1 411 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 ZNF793Q6ZN11 406 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 TMPRSS9Q7Z410 1059 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 GTPBP8Q8N3Z3 284 aaPredicted RBP13.62□□□□□ -0.23
UBAP1-202ENST00000359544 ARL14Q8N4G2 192 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 SDR9C7Q8NEX9 313 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 OR5AR1Q8NGP9 310 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 NXPE3Q969Y0 559 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 ZNF514Q96K75 400 aaPredicted RBP13.62□□□□□ -0.23
UBAP1-202ENST00000359544 LINC00615Q96LM1 132 aaPredicted RBP13.62□□□□□ -0.23
UBAP1-202ENST00000359544 IL21RQ9HBE5 538 aa13.62□□□□□ -0.23
UBAP1-202ENST00000359544 TRAV27A0A087WT01 109 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 RNF222A6NCQ9 220 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 C1orf196B1AJZ1 125 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 LEFTY1O75610 366 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 GDI1P31150 447 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 NAA10P41227 235 aaPredicted RBP13.61□□□□□ -0.23
UBAP1-202ENST00000359544 EEF1A1P68104 462 aaKnown RBP13.61□□□□□ -0.23
UBAP1-202ENST00000359544 CXADRP78310 365 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 DUSP2Q05923 314 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 CORO6Q6QEF8 472 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 ZNF227Q86WZ6 799 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 OR2L13Q8N349 312 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 SLC35A4Q96G79 324 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 TINAGL1Q9GZM7 467 aaPredicted RBP13.61□□□□□ -0.23
UBAP1-202ENST00000359544 CHST6Q9GZX3 395 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 MYOZ1Q9NP98 299 aaPredicted RBP13.61□□□□□ -0.23
UBAP1-202ENST00000359544 TREM1Q9NP99 234 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 ZNF230Q9UIE0 474 aaPredicted RBP13.61□□□□□ -0.23
UBAP1-202ENST00000359544 DENND4CQ5VZ89 1909 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 C5orf52A6NGY3 159 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 WRBO00258 174 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 C8orf89P0DMQ9 161 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 TMIGD3P0DMS9 266 aaPredicted RBP13.61□□□□□ -0.23
UBAP1-202ENST00000359544 PTAFRP25105 342 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 PAX6P26367 422 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 TAF13Q15543 124 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 AMZ1Q400G9 498 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 C12orf40Q86WS4 652 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 OR51A7Q8NH64 312 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 SLC25A21Q9BQT8 299 aaPredicted RBP13.61□□□□□ -0.23
UBAP1-202ENST00000359544 POTEKPQ9BYX7 375 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 BCL2L14Q9BZR8 327 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 CCDC86Q9H6F5 360 aaKnown RBP13.61□□□□□ -0.23
UBAP1-202ENST00000359544 MMP26Q9NRE1 261 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 FBXL21Q9UKT6 434 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 PLEKHA6Q9Y2H5 1048 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 KIAA1549LQ6ZVL6 1849 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 ZDBF2Q9HCK1 2354 aa13.61□□□□□ -0.23
UBAP1-202ENST00000359544 GGT3PA6NGU5 568 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 FADS1O60427 444 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 POP7O75817 140 aaKnown RBP13.6□□□□□ -0.23
UBAP1-202ENST00000359544 ACTL6AO96019 429 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 CASRP41180 1078 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 DUSP8Q13202 625 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 HABP2Q14520 560 aaPredicted RBP13.6□□□□□ -0.23
UBAP1-202ENST00000359544 NKAPLQ5M9Q1 402 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms