RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 NAA11Q9BSU3 229 aaPredicted RBP12.13□□□□□ -0.47
CCDC197-201ENST00000359253 NAA50Q9GZZ1 169 aaKnown RBP12.13□□□□□ -0.47
CCDC197-201ENST00000359253 NDUFB11Q9NX14 153 aa12.13□□□□□ -0.47
CCDC197-201ENST00000359253 PRSS37A4D1T9 235 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 NPIPA5E9PKD4 350 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 H3BML4 177 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 PHYHO14832 338 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 ARHGEF9O43307 516 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 MT-ND5P03915 603 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 NR2C1P13056 603 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 SERPINB10P48595 397 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 CXADRP78310 365 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 MRPL28Q13084 256 aaKnown RBP12.12□□□□□ -0.47
CCDC197-201ENST00000359253 TRAM1Q15629 374 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 INPP5JQ15735 1006 aaPredicted RBP12.12□□□□□ -0.47
CCDC197-201ENST00000359253 GXYLT1Q4G148 440 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 MESTQ5EB52 335 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 EEF1A1P5Q5VTE0 462 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 PAQR6Q6TCH4 344 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 ZNF322Q6U7Q0 402 aaPredicted RBP12.12□□□□□ -0.47
CCDC197-201ENST00000359253 ASB18Q6ZVZ8 466 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 USP43Q70EL4 1123 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 KCTD20Q7Z5Y7 419 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 LHFPL3Q86UP9 236 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 ZBTB46Q86UZ6 589 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 ZNF227Q86WZ6 799 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 SYS1Q8N2H4 156 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 KBTBD8Q8NFY9 601 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 OR10H4Q8NGA5 316 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 ZHX1-C8orf76Q96EF9 292 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 JSRP1Q96MG2 331 aaPredicted RBP12.12□□□□□ -0.47
CCDC197-201ENST00000359253 C5orf34Q96MH7 638 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 OR5B2Q96R09 309 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 ALG12Q9BV10 488 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 ALG8Q9BVK2 526 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 OR2B2Q9GZK3 357 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 ASB6Q9NWX5 421 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 BABAM2Q9NXR7 383 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 TAS2R16Q9NYV7 291 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 NPIPA1Q9UND3 350 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 POLHQ9Y253 713 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 RASD1Q9Y272 281 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 KLF13Q9Y2Y9 288 aaPredicted RBP12.12□□□□□ -0.47
CCDC197-201ENST00000359253 HRH3Q9Y5N1 445 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 TMEM14AQ9Y6G1 99 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 CELSR3Q9NYQ7 3312 aa12.12□□□□□ -0.47
CCDC197-201ENST00000359253 OR2M5A3KFT3 312 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 HSPB2A8KAH6 182 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 C11orf98E9PRG8 122 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 KLRC4-KLRK1H3BQV0 150 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 MASP2O00187 686 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 SULT2B1O00204 365 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 NKX2-8O15522 239 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 NEURL1O76050 574 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 WISP1O95388 367 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 GAAP10253 952 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 WT1P19544 449 aaPredicted RBP12.11□□□□□ -0.47
CCDC197-201ENST00000359253 DNASE1L1P49184 302 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 OR2B6P58173 313 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 HSF1Q00613 529 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 MFAP5Q13361 173 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 OR1C1Q15619 314 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 HSPB2Q16082 182 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 DGUOKQ16854 277 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 TMEM176BQ3YBM2 270 aaPredicted RBP12.11□□□□□ -0.47
CCDC197-201ENST00000359253 LINC01590Q5TEZ4 76 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 RAET1LQ5VY80 246 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 SLC16A9Q7RTY1 509 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 ATCAYQ86WG3 371 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 PHC2Q8IXK0 858 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 ATP6V1C2Q8NEY4 427 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 ZFAND2BQ8WV99 257 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 HAS2Q92819 552 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 ADAD1Q96M93 576 aaKnown RBP12.11□□□□□ -0.47
CCDC197-201ENST00000359253 OXGR1Q96P68 337 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 NPAS1Q99742 590 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 MARCH7Q9H992 704 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 TRIM36Q9NQ86 728 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 RPRD1BQ9NQG5 326 aaKnown RBP12.11□□□□□ -0.47
CCDC197-201ENST00000359253 QPCTLQ9NXS2 382 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 STUB1Q9UNE7 303 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 SSR3Q9UNL2 185 aa12.11□□□□□ -0.47
CCDC197-201ENST00000359253 PCSK5Q92824 1860 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 A0A1W2PPW3 197 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 OR5H15A6NDH6 313 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 AQP7P3A6NL99 342 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 ZNF670-ZNF695F2Z2N8 137 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 CD1AP06126 327 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 CLUP10909 449 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 CD46P15529 392 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 GADD45AP24522 165 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 PCSK6P29122 969 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 GABRA5P31644 462 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 CDC20Q12834 499 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 SRSF6Q13247 344 aaKnown RBP12.1□□□□□ -0.47
CCDC197-201ENST00000359253 POU4F3Q15319 338 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 SSX1Q16384 188 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 HYAL4Q2M3T9 481 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 PDSS1Q5T2R2 415 aa12.1□□□□□ -0.47
CCDC197-201ENST00000359253 TMEM225Q6GV28 225 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms