RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 KCNIP1Q9NZI2 227 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 SHPKQ9UHJ6 478 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 TMED7Q9Y3B3 224 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 SLC22A23A1A5C7 686 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 KRBOX1C9JBD0 128 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 RFXAPO00287 272 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 P2RY10O00398 339 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 ICMTO60725 284 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 CD79AP11912 226 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 PTBP1P26599 531 aaKnown RBP eCLIP12.63□□□□□ -0.39
VCP-201ENST00000358901 CDC20Q12834 499 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 ABHD17BQ5VST6 288 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 STK35Q8TDR2 534 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 RAB3CQ96E17 227 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 CCDC163A0A0D9SF12 145 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 LINC01553A4QN01 128 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 FITM1A5D6W6 292 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 FTCDNL1E5RQL4 147 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 LAMTOR5O43504 91 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 ANXA7P20073 488 aaKnown RBP12.63□□□□□ -0.39
VCP-201ENST00000358901 CSNK1EP49674 416 aaKnown RBP12.63□□□□□ -0.39
VCP-201ENST00000358901 POLR2HP52434 150 aaKnown RBP12.63□□□□□ -0.39
VCP-201ENST00000358901 UBE2NP61088 152 aaKnown RBP12.63□□□□□ -0.39
VCP-201ENST00000358901 C14orf28Q4W4Y0 310 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 CNRIP1Q96F85 164 aaPredicted RBP12.63□□□□□ -0.39
VCP-201ENST00000358901 ASB16Q96NS5 453 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 SLC46A1Q96NT5 459 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 LRFN1Q9P244 771 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 GPR55Q9Y2T6 319 aaPredicted RBP12.63□□□□□ -0.39
VCP-201ENST00000358901 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 THBS1P07996 1170 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 HIST1H1CP16403 213 aaKnown RBP12.63□□□□□ -0.39
VCP-201ENST00000358901 MRPL19P49406 292 aaKnown RBP12.63□□□□□ -0.39
VCP-201ENST00000358901 PRAMEF20Q5VT98 475 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 NIPAL3Q6P499 406 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 Q6ZNB5 142 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 OR14K1Q8NGZ2 314 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 FGF21Q9NSA1 209 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 ECM29Q5VYK3 1845 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 APC2O95996 2303 aa12.63□□□□□ -0.39
VCP-201ENST00000358901 OR7C1O76099 320 aaPredicted RBP12.62□□□□□ -0.39
VCP-201ENST00000358901 SNRNP70P08621 437 aaKnown RBP12.62□□□□□ -0.39
VCP-201ENST00000358901 HOXB9P17482 250 aaPredicted RBP12.62□□□□□ -0.39
VCP-201ENST00000358901 PRPH2P23942 346 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 HOXA9P31269 272 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 SELENBP1Q13228 472 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 BCL2A1Q16548 175 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 SLC36A2Q495M3 483 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 KANSL1Q7Z3B3 1105 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 OR13C5Q8NGS8 318 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 OR1S1Q8NH92 325 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 OR14A16Q8NHC5 309 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 STACQ99469 402 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 SEMA6CQ9H3T2 930 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 CGGBP1Q9UFW8 167 aaPredicted RBP12.62□□□□□ -0.39
VCP-201ENST00000358901 ETV7Q9Y603 341 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 PIGBOS1A0A0B4J2F0 54 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 SURF4O15260 269 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 ITGBL1O95965 494 aaPredicted RBP12.62□□□□□ -0.39
VCP-201ENST00000358901 MPEG1Q2M385 716 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 EIF2S3LQ2VIR3 472 aaKnown RBP12.62□□□□□ -0.39
VCP-201ENST00000358901 FAM27D1Q5T7N8 215 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 OR51S1Q8NGJ8 323 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 IL1F10Q8WWZ1 152 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 SLAMF9Q96A28 289 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 FGGYQ96C11 551 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 STEAP1Q9UHE8 339 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 M0R082 166 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 ALX3O95076 343 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 MYOGP15173 224 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 CD22P20273 847 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 NUDT1P36639 197 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 RPS27P42677 84 aaKnown RBP12.62□□□□□ -0.39
VCP-201ENST00000358901 BIDP55957 195 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 OR10A3P58181 314 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 IHHQ14623 411 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 KIAA0895LQ68EN5 471 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 UNQ6126/PRO20091Q6UXV3 157 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 SVBPQ8N300 66 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 OR2A1Q8NGT9 310 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 CMSS1Q9BQ75 279 aaKnown RBP12.62□□□□□ -0.39
VCP-201ENST00000358901 SLC38A1Q9H2H9 487 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 OR51B6Q9H340 312 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 KLHL13Q9P2N7 655 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 GABARAPH6UMI1 98 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 UPK1AO00322 258 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 MED6O75586 246 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 SNAPINO95295 136 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 BLVRBP30043 206 aaPredicted RBP12.62□□□□□ -0.39
VCP-201ENST00000358901 CCR2P41597 374 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 TAS2R20P59543 309 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 ECH1Q13011 328 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 ARHGAP11BQ3KRB8 267 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 LRRC18Q8N456 261 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 PIGCQ92535 297 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 RSC1A1Q92681 617 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 SRRQ9GZT4 340 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 LYRM4Q9HD34 91 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 TMPRSS11EQ9UL52 423 aa12.62□□□□□ -0.39
VCP-201ENST00000358901 PCDHGA1Q9Y5H4 931 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms