RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 PSMB1P20618 241 aaKnown RBP11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 MAKP20794 623 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 EFNA3P52797 238 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 EEF1A1P68104 462 aaKnown RBP11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 FOXK2Q01167 660 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 ISXQ2M1V0 245 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 HES3Q5TGS1 186 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 RHBDD2Q6NTF9 364 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 TMEM81Q6P7N7 255 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 UNQ9370/PRO34162Q6UXP9 181 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 ZNF836Q6ZNA1 936 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 Q6ZTK2 550 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 GHSRQ92847 366 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 ZFP3Q96NJ6 502 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 PTCHD1Q96NR3 888 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 HRASLSQ9HDD0 168 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 C12orf4Q9NQ89 552 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 SLC22A11Q9NSA0 550 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 RDH8Q9NYR8 311 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 PISDQ9UG56 409 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 ING1Q9UK53 422 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 MRPS33Q9Y291 106 aaKnown RBP11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 OR2M5A3KFT3 312 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 DUXAA6NLW8 204 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 PRR23D1E9PI22 279 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 CLDN4O14493 209 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 OR10H2O60403 315 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 TMEM127O75204 238 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 STX11O75558 287 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 PPM1BO75688 479 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 GATBO75879 557 aaKnown RBP11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 OR2A4O95047 310 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 IFNA16P05015 189 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 GIPP09681 153 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 CT62P0C5K7 136 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 PRR23D2P0DMB1 279 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 MAP2K6P52564 334 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 OR12D2P58182 307 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 ACTC1P68032 377 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 ACTA1P68133 377 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 TRA2AQ13595 282 aaKnown RBP eCLIP11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 EXOSC7Q15024 291 aaKnown RBP11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 UBE2NLQ5JXB2 153 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 TMPRSS11FQ6ZWK6 438 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 RAB11FIP2Q7L804 512 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 PIP4P1Q86T03 277 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 OR6V1Q8N148 313 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 OR7G2Q8NG99 324 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 OR5J2Q8NH18 312 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 TSLPQ969D9 159 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 OR2A7Q96R45 310 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 MESP1Q9BRJ9 268 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 DPH1Q9BZG8 443 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 ULBP3Q9BZM4 244 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 COQ3Q9NZJ6 369 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 SRPK3Q9UPE1 567 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 SLC35A3Q9Y2D2 325 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 B3GALT1Q9Y5Z6 326 aa11.54□□□□□ -0.56
RTFDC1-202ENST00000357348 TRAPPC13A5PLN9 417 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 J3QLW9 94 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 HRKO00198 91 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 GMDSO60547 372 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 ARL6IP5O75915 188 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 RCBTB2O95199 551 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 ECDO95905 644 aaPredicted RBP11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 AGR2O95994 175 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 MT-CO3P00414 261 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 THBS1P07996 1170 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 ZNF19P17023 458 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 CXCL2P19875 107 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 PGDP52209 483 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 TSPAN5P62079 268 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 DUSP8Q13202 625 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 OLFML2AQ68BL7 652 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 C3P1Q6ZMU1 363 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 WDR88Q6ZMY6 472 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 ADAMTS15Q8TE58 950 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 SMPDL3BQ92485 455 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 MVB12AQ96EY5 273 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 LINC00052Q96N35 136 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 SFXN2Q96NB2 322 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 DDOQ99489 341 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 AUNIPQ9H7T9 357 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 KLHL1Q9NR64 748 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 SDHAF2Q9NX18 166 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 AKAP7Q9P0M2 348 aaPredicted RBP11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 MKL2Q9ULH7 1088 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 SIGLEC7Q9Y286 467 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 SPTBN2O15020 2390 aa11.53□□□□□ -0.56
RTFDC1-202ENST00000357348 A0A0B4J203 849 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 A8MXK9 166 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 CTNSO60931 367 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 B3GALNT1O75752 331 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 IL5P05113 134 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 IFNGR1P15260 489 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 BMP7P18075 431 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 DRD5P21918 477 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 RPS4Y1P22090 263 aaKnown RBP11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 CCKBRP32239 447 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms