RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 AMZ1Q400G9 498 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 CYB5R2Q6BCY4 276 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 MRM1Q6IN84 353 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF765Q7L2R6 523 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 PXKQ7Z7A4 578 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 C12orf76Q8N812 135 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 SYNPRQ8TBG9 265 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 CA5BP1Q8WTZ4 195 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 LCN9Q8WX39 176 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF707Q96C28 371 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 HSPA12BQ96MM6 686 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 NMNAT3Q96T66 252 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 VRK1Q99986 396 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 PIGMQ9H3S5 423 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMEM74BQ9NUR3 256 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 ABRACLQ9P1F3 81 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 INSL6Q9Y581 213 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 MTCL1Q9Y4B5 1905 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 A0A1W2PP55 124 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR6C74A6NCV1 312 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR2W5A6NFC9 320 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 HMSDA8MTL9 139 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 GRXCR1A8MXD5 290 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 SLC31A1O15431 190 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 OIP5O43482 229 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 KRT33AO76009 404 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 SRMP19623 302 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 CNR1P21554 472 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 CMPK1P30085 196 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 ADH7P40394 386 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 RAB2AP61019 212 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 UBE2IP63279 158 aaKnown RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 BLOC1S1P78537 153 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 ACY1Q03154 408 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 RPE65Q16518 533 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 CDNFQ49AH0 187 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 ALG10BQ5I7T1 473 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 H3F3CQ6NXT2 135 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 PSRC1Q6PGN9 363 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 UQCC3Q6UW78 93 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 RNF44Q7L0R7 432 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 C10orf53Q8N6V4 93 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR8S1Q8NH09 359 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 SMIM19Q96E16 107 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 MEGF10Q96KG7 1140 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 OPA3Q9H6K4 179 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 KLHL9Q9P2J3 617 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 KCNE5Q9UJ90 142 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR10H1Q9Y4A9 318 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 TBC1D3EA0A087X179 549 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 TBC1D3KA0A087X1G2 549 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 GXYLT2A0PJZ3 443 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 TBC1D3FA6NER0 549 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 MAS1P04201 325 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 HIST1H2ABP04908 130 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 SLC35G6P0C7Q6 338 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 AKR1C2P52895 323 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 RPS15P62841 145 aaKnown RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 AKR1C1Q04828 323 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 CDK5R1Q15078 307 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 NDUFAF6Q330K2 333 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 UBE2NLQ5JXB2 153 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 YOD1Q5VVQ6 348 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 PRAMEF8Q5VWM4 474 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 PRAMEF7Q5VXH5 474 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 OTPQ5XKR4 325 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 TBC1D3GQ6DHY5 549 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 HEPHL1Q6MZM0 1159 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 SEZ6L2Q6UXD5 910 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 HIST3H2AQ7L7L0 130 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 DPPA2Q7Z7J5 298 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZAR1Q86SH2 424 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 SLC43A2Q8N370 569 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 SPICQ8N5J4 248 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR5M1Q8NGP8 315 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 TNFAIP8L1Q8WVP5 186 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 HIST1H2ACQ93077 130 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 FBXO17Q96EF6 278 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 S100A16Q96FQ6 103 aaKnown RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 COX14Q96I36 57 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 C14orf144Q96I85 54 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR1F2PQ96R84 312 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 CNN2Q99439 309 aaKnown RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 GAS2L1Q99501 681 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 NRIP3Q9NQ35 241 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 NPDC1Q9NQX5 325 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 METTL1Q9UBP6 276 aaKnown RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 SERGEFQ9UGK8 458 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 GTF2A1LQ9UNN4 478 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 COL4A3Q01955 1670 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 GMFGO60234 142 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMIGD3P0DMS9 266 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 GAAP10253 952 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 COX5BP10606 129 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 TLX1P31314 330 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 RPS27P42677 84 aaKnown RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 AP3S2P59780 193 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 GMFBP60983 142 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 RAB4BP61018 213 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms