RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 OR5H1A6NKK0 313 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 NUDT19A8MXV4 375 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ATXN1LP0C7T5 689 aaKnown RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 POU3F3P20264 500 aaPredicted RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 SSTR4P31391 388 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 TM4SF4P48230 202 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 NKX2-5P52952 324 aaPredicted RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 RACK1P63244 317 aaKnown RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 HOXC5Q00444 222 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ILKQ13418 452 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 POU4F3Q15319 338 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ESPNLQ6ZVH7 1005 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 HIST2H3AQ71DI3 136 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 MED25Q71SY5 747 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 SYT13Q7L8C5 426 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ZFP90Q8TF47 636 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 APH1AQ96BI3 265 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ZBED3Q96IU2 234 aaPredicted RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 SLC22A12Q96S37 553 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 PCDHGA5Q9Y5G8 931 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 TRBV4-1A0A0J9YWV2 114 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 FADS1O60427 444 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ALOX12BO75342 701 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 OR8G3PP0DMU2 310 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 GDNFP39905 211 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 TATDN3Q17R31 274 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 TMEM31Q5JXX7 168 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 C9orf135Q5VTT2 229 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 SFXN4Q6P4A7 337 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 DOK3Q7L591 496 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 PRSS35Q8N3Z0 413 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 OR52N1Q8NH53 320 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 GAB3Q8WWW8 586 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 NEURL3Q96EH8 262 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ATF6BQ99941 703 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ARV1Q9H2C2 271 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 PRSS16Q9NQE7 514 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.98□□□□□ -1.45
UPF2-201ENST00000356352 PADI1Q9ULC6 663 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 TEX51A0A1B0GUA7 166 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 FOXD2O60548 495 aaPredicted RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 VAMP5O95183 116 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 CHRM2P08172 466 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 FURINP09958 794 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 OR10J4P0C629 311 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 LIPCP11150 499 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ACHEP22303 614 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 CD27P26842 260 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 TRHRP34981 398 aaPredicted RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 ZNF93P35789 620 aaPredicted RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 GJA5P36382 358 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 MPPED2Q15777 294 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 PAPD4Q6PIY7 484 aaKnown RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 SLC35D2Q76EJ3 337 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 CLEC14AQ86T13 490 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 KDM8Q8N371 416 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 LRRC15Q8TF66 581 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 TMEM174Q8WUU8 243 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 SLC35E1Q96K37 410 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 SLC29A1Q99808 456 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 MACROD1Q9BQ69 325 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 SLC25A21Q9BQT8 299 aaPredicted RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 TMEM38AQ9H6F2 299 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 SIAEQ9HAT2 523 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 EMC7Q9NPA0 242 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 THAP10Q9P2Z0 257 aaPredicted RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 ADAM10O14672 748 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 TNFRSF10CO14798 259 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 GLCEO94923 617 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 GASTP01350 101 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 HLA-FP30511 346 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 WNT7BP56706 349 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 DEFB103AP81534 67 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 MAT1AQ00266 395 aaKnown RBP5.97□□□□□ -1.45
UPF2-201ENST00000356352 LTC4SQ16873 150 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 FAM26DQ5JW98 314 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 GRINAQ7Z429 371 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 SPRED1Q7Z699 444 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 SYT9Q86SS6 491 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 EMG1Q92979 244 aaKnown RBP5.97□□□□□ -1.45
UPF2-201ENST00000356352 FGGYQ96C11 551 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 DCBLD2Q96PD2 775 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 LYSMD1Q96S90 227 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 DCLRE1CQ96SD1 692 aaKnown RBP5.97□□□□□ -1.45
UPF2-201ENST00000356352 GINS3Q9BRX5 216 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 MKRN2Q9H000 416 aaKnown RBP5.97□□□□□ -1.45
UPF2-201ENST00000356352 KIAA1456Q9P272 454 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 NUMBLQ9Y6R0 609 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 NAV1Q8NEY1 1877 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 TMEM72A0PK05 275 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 CRYM-AS1A6NIL9 109 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 FAM183AA6NL82 134 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 DEGS1O15121 323 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 PHF1O43189 567 aaPredicted RBP5.97□□□□□ -1.45
UPF2-201ENST00000356352 DOK2O60496 412 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 ALPLP05186 524 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 ARR3P36575 388 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 FOXK2Q01167 660 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 HES1Q14469 280 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 RAB6CQ53S08 254 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms