RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 IRF8Q02556 426 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 PDE7AQ13946 482 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 LANCL3Q6ZV70 420 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 ZNF467Q7Z7K2 595 aaPredicted RBP14.4□□□□□ -0.1
RTN3-205ENST00000356000 ZNF227Q86WZ6 799 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 ZNF664Q8N3J9 261 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 OR10H4Q8NGA5 316 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 SLC25A36Q96CQ1 311 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 SEC22AQ96IW7 307 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 PRRC1Q96M27 445 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 ADAM2Q99965 735 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 SPATC1LQ9H0A9 340 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 RGCCQ9H4X1 137 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 ZFYVE1Q9HBF4 777 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 POT1Q9NUX5 634 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 CNIH4Q9P003 139 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 ST6GALNAC2Q9UJ37 374 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 CTNSO60931 367 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 FURINP09958 794 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 FGF7P21781 194 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 RGS8P57771 180 aaPredicted RBP14.4□□□□□ -0.1
RTN3-205ENST00000356000 TNFAIP8L2Q6P589 184 aaPredicted RBP14.4□□□□□ -0.1
RTN3-205ENST00000356000 LCTLQ6UWM7 567 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 BTNL8Q6UX41 500 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 HIST2H3AQ71DI3 136 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 SCN4BQ8IWT1 228 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 ZNF610Q8N9Z0 462 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 OR4K14Q8NGD5 310 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 SCAMP5Q8TAC9 235 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 ADAMTS17Q8TE56 1095 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 TMEM169Q96HH4 297 aa14.4□□□□□ -0.1
RTN3-205ENST00000356000 SLC5A10A0PJK1 596 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 PHOX2AO14813 284 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 SOX15O60248 233 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 TMEM127O75204 238 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 GLSO94925 669 aaPredicted RBP14.39□□□□□ -0.11
RTN3-205ENST00000356000 KCNE1P15382 129 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 HLA-GP17693 338 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 CD1CP29017 333 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 RAB1AP62820 205 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 ARHGAP1Q07960 439 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 STPG1Q5TH74 334 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 GFI1BQ5VTD9 330 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 NIPAL3Q6P499 406 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 FRRS1Q6ZNA5 592 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 MEPCEQ7L2J0 689 aaKnown RBP14.39□□□□□ -0.11
RTN3-205ENST00000356000 LRRTM4Q86VH4 590 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 OR1J1Q8NGS3 322 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 IGSF8Q969P0 613 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 ZNF607Q96SK3 696 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 SYT4Q9H2B2 425 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 IL17CQ9P0M4 197 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 PRODH2Q9UF12 536 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 OR5V1Q9UGF6 321 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 ZC3H12DA2A288 527 aaKnown RBP14.39□□□□□ -0.11
RTN3-205ENST00000356000 DRGXA6NNA5 263 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 ANKRD66B4E2M5 251 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 INSIG1O15503 277 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 GPR32O75388 356 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 AKAIN1P0CW23 69 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 LPAR6P43657 344 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 OR12D2P58182 307 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 INSM1Q01101 510 aaPredicted RBP14.39□□□□□ -0.11
RTN3-205ENST00000356000 ZNHIT3Q15649 155 aaPredicted RBP14.39□□□□□ -0.11
RTN3-205ENST00000356000 DEFB123Q8N688 67 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 OR7G2Q8NG99 324 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 OR4K17Q8NGC6 315 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 SPATA33Q96N06 139 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 ZNF558Q96NG5 402 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 FBXO44Q9H4M3 255 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 UPB1Q9UBR1 384 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 ADAM18Q9Y3Q7 739 aa14.39□□□□□ -0.11
RTN3-205ENST00000356000 H7BY64 318 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 DLL1O00548 723 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 ZNF208O43345 1280 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 XRCC3O43542 346 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 TMEM11P17152 192 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 IGFBP6P24592 240 aaPredicted RBP14.38□□□□□ -0.11
RTN3-205ENST00000356000 CD34P28906 385 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 TDGF1P3P51864 188 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 YBEYP58557 167 aaPredicted RBP14.38□□□□□ -0.11
RTN3-205ENST00000356000 RPS26P62854 115 aaKnown RBP14.38□□□□□ -0.11
RTN3-205ENST00000356000 MC1RQ01726 317 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 SLC10A1Q14973 349 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 TMEM35AQ53FP2 167 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 PRRT3Q5FWE3 981 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 DCAF10Q5QP82 559 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 PEG10Q86TG7 708 aaKnown RBP14.38□□□□□ -0.11
RTN3-205ENST00000356000 OR6J1Q8NGC5 347 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 GPR148Q8TDV2 347 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 FAM46AQ96IP4 442 aaKnown RBP14.38□□□□□ -0.11
RTN3-205ENST00000356000 C20orf24Q9BUV8 137 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 HDGFL3Q9Y3E1 203 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 A0A0B4J2A0 478 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 TMEM238LA0A1B0GVL6 79 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 SOX1O00570 391 aaPredicted RBP14.38□□□□□ -0.11
RTN3-205ENST00000356000 CCSO14618 274 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 PRAMEF12O95522 483 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 ST6GAL1P15907 406 aa14.38□□□□□ -0.11
RTN3-205ENST00000356000 ZNF763Q0D2J5 394 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms