RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 RBMXL3Q8N7X1 1067 aaKnown RBP16.62■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF511Q8NB15 262 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 PIGTQ969N2 578 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 NT5DC2Q9H857 520 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 CHD2O14647 1828 aaKnown RBP16.62■□□□□ 0.25
COL18A1-202ENST00000355480 FBXO24O75426 580 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF784Q8NCA9 323 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-202ENST00000355480 GIMAP1Q8WWP7 306 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 FGGYQ96C11 551 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 CEPT1Q9Y6K0 416 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF732B4DXR9 585 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 GRPP07492 148 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 CHRNB1P11230 501 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 SORDQ00796 357 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 RBMS2Q15434 407 aaKnown RBP16.62■□□□□ 0.25
COL18A1-202ENST00000355480 LIPHQ8WWY8 451 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 RASD2Q96D21 266 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 PBX4Q9BYU1 374 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 HRH4Q9H3N8 390 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 SEMA4GQ9NTN9 838 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 C1orf123Q9NWV4 160 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 LUZP4Q9P127 313 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 PIP5K1CO60331 668 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 AKR7A3O95154 331 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 CDK4P11802 303 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 CR2P20023 1033 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 ELAVL1Q15717 326 aaKnown RBP16.62■□□□□ 0.25
COL18A1-202ENST00000355480 PLK5Q496M5 336 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 FAM71E1Q6IPT2 247 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 CYP4V2Q6ZWL3 525 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-202ENST00000355480 PGAP1Q75T13 922 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 KDM3BQ7LBC6 1761 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 K7EPK0 472 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 IL3RAP26951 378 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 ILKQ13418 452 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 H1FNTQ75WM6 255 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-202ENST00000355480 OR6V1Q8N148 313 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 FAM71E2Q8N5Q1 922 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 ABHD4Q8TB40 342 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 PRR14Q9BWN1 585 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 PCDHGA5Q9Y5G8 931 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 TMEM265A0A087WTH1 108 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 A6NHS1 94 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 NRG2O14511 850 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-202ENST00000355480 ALKBH1Q13686 389 aaKnown RBP16.61■□□□□ 0.25
COL18A1-202ENST00000355480 EDDM3AQ14507 147 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 GALNT9Q9HCQ5 603 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 OSGIN1Q9UJX0 560 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 C17orf112F2Z3M2 114 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 PLPP1O14494 284 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 SHC1P29353 583 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF93P35789 620 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-202ENST00000355480 PYCR3Q53H96 274 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 DCXRQ7Z4W1 244 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 WDR5BQ86VZ2 330 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 GJC3Q8NFK1 279 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 KCTD12Q96CX2 325 aaKnown RBP16.61■□□□□ 0.25
COL18A1-202ENST00000355480 FOXQ1Q9C009 403 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 A0A1W2PPH5 198 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 LRIT2A6NDA9 550 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 HEXAP06865 529 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 SSTR2P30874 369 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 HTR1FP30939 366 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 POLR2IP36954 125 aaKnown RBP16.61■□□□□ 0.25
COL18A1-202ENST00000355480 AFMIDQ63HM1 303 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 GRINAQ7Z429 371 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 CPNE4Q96A23 557 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-202ENST00000355480 HRASLS5Q96KN8 279 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 LANCL2Q9NS86 450 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 UBBP0CG47 229 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 CPT2P23786 658 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 FPR3P25089 353 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 ANKRD33Q7Z3H0 272 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 GMPR2Q9P2T1 348 aaKnown RBP16.61■□□□□ 0.25
COL18A1-202ENST00000355480 GNG13Q9P2W3 67 aa16.61■□□□□ 0.25
COL18A1-202ENST00000355480 OLFM2O95897 454 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 IL10RAQ13651 578 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 LPCAT3Q6P1A2 487 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 BHLHE23Q8NDY6 225 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF486Q96H40 463 aaPredicted RBP16.6■□□□□ 0.25
COL18A1-202ENST00000355480 OR52A1Q9UKL2 312 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 PIGLQ9Y2B2 252 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 MED6O75586 246 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 APEHP13798 732 aaKnown RBP16.6■□□□□ 0.25
COL18A1-202ENST00000355480 POU4F3Q15319 338 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 TATDN3Q17R31 274 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 ATPAF1Q5TC12 328 aaPredicted RBP16.6■□□□□ 0.25
COL18A1-202ENST00000355480 BOD1Q96IK1 185 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 OR2M2Q96R28 347 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 STACQ99469 402 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF728P0DKX0 622 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 NFYBP25208 207 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 GPR85P60893 370 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 DCLRE1CQ96SD1 692 aaKnown RBP16.6■□□□□ 0.25
COL18A1-202ENST00000355480 TAS2R16Q9NYV7 291 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 NPFFR2Q9Y5X5 522 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 CLDN1O95832 211 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 MT-ATP6P00846 226 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 ETV6P41212 452 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 YRDCQ86U90 279 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms