RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TNFSF14O43557 240 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 NFYAP23511 347 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-201ENST00000355430 GZMMP51124 257 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 BEX5Q5H9J7 111 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 AWAT2Q6E213 333 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 GTPBP8Q8N3Z3 284 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-201ENST00000355430 TMEM185AQ8NFB2 350 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 PHB2Q99623 299 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 PDCD1LG2Q9BQ51 273 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 LIN7BQ9HAP6 207 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 SPTY2D1-AS1A0A0U1RR47 76 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 DDAH2O95865 285 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 AVPR2P30518 371 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 GZMKP49863 264 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 C12orf45Q8N5I9 185 aaPredicted RBP11.33□□□□□ -0.6
COLCA1-201ENST00000355430 ALG12Q9BV10 488 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 POLR2AP24928 1970 aaKnown RBP11.33□□□□□ -0.6
COLCA1-201ENST00000355430 IGHA2P01877 340 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 PET100P0DJ07 73 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF35P13682 527 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 HSD17B7P56937 341 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 ANKRD53Q8N9V6 530 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 STEAP2Q8NFT2 490 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 DUSP19Q8WTR2 217 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 ADOQ96SZ5 270 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 SLC23A2Q9UGH3 650 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 WDR90Q96KV7 1748 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 SERTM1A2A2V5 107 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 SOD1P00441 154 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 NPR2P20594 1047 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 IL10RAQ13651 578 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 TRMT12Q53H54 448 aaKnown RBP11.33□□□□□ -0.6
COLCA1-201ENST00000355430 SYT9Q86SS6 491 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 MISPQ8IVT2 679 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 GPR32P1Q8NGA4 272 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 DCUN1D4Q92564 292 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 HCAR1Q9BXC0 346 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 TBC1D29Q9UFV1 150 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 MAGEB4O15481 346 aaPredicted RBP11.33□□□□□ -0.6
COLCA1-201ENST00000355430 ATP1B1P05026 303 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 SBK2P0C263 348 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 PVALBP20472 110 aaPredicted RBP11.33□□□□□ -0.6
COLCA1-201ENST00000355430 MAKP20794 623 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 ESPNLQ6ZVH7 1005 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 CD300LFQ8TDQ1 290 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 DHRS1Q96LJ7 313 aa11.33□□□□□ -0.6
COLCA1-201ENST00000355430 SRMP19623 302 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 RPL35P42766 123 aaKnown RBP11.32□□□□□ -0.6
COLCA1-201ENST00000355430 CAPZBP47756 277 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 VAMP2P63027 116 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 RBMS2Q15434 407 aaKnown RBP11.32□□□□□ -0.6
COLCA1-201ENST00000355430 GPR155Q7Z3F1 870 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 CD163Q86VB7 1156 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 TCTE3Q8IZS6 198 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 RDH10Q8IZV5 341 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 RBPMSQ93062 196 aaKnown RBP11.32□□□□□ -0.6
COLCA1-201ENST00000355430 ELOVL3Q9HB03 270 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 DYNLRB1Q9NP97 96 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 UBQLN4Q9NRR5 601 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 SLC6A5Q9Y345 797 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 PPP3CBP16298 524 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 EEF1A1P68104 462 aaKnown RBP11.32□□□□□ -0.6
COLCA1-201ENST00000355430 MC2RQ01718 297 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 DHRS13Q6UX07 377 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 PXKQ7Z7A4 578 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 OR7G2Q8NG99 324 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 RASD2Q96D21 266 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 BCL2L10Q9HD36 194 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 hCG_1807616A0A1W2PRN6 198 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 ANXA7P20073 488 aaKnown RBP11.32□□□□□ -0.6
COLCA1-201ENST00000355430 INSL4Q14641 139 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 WBP2NLQ6ICG8 309 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 ADGRF3Q8IZF5 1079 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 PGAM5Q96HS1 289 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 DDOQ99489 341 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 ENKD1Q9H0I2 346 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 FBXL2Q9UKC9 423 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 GGT3PA6NGU5 568 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF891A8MT65 544 aaPredicted RBP11.32□□□□□ -0.6
COLCA1-201ENST00000355430 F8W036 122 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 PIAS2O75928 621 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 SIX6O95475 246 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 BLOC1S1P78537 153 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 SPOCK1Q08629 439 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 HAVCR2Q8TDQ0 301 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 NINJ1Q92982 152 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 DCLRE1CQ96SD1 692 aaKnown RBP11.32□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF700Q9H0M5 742 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 MAN2C1Q9NTJ4 1040 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 ACOXLQ9NUZ1 547 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 MBD1Q9UIS9 605 aaPredicted RBP11.32□□□□□ -0.6
COLCA1-201ENST00000355430 PCDHGA5Q9Y5G8 931 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 KCNE3Q9Y6H6 103 aa11.32□□□□□ -0.6
COLCA1-201ENST00000355430 MICAL3Q7RTP6 2002 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 DLL1O00548 723 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 DAP3P51398 398 aaKnown RBP11.31□□□□□ -0.6
COLCA1-201ENST00000355430 MZT1Q08AG7 82 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 RSC1A1Q92681 617 aa11.31□□□□□ -0.6
COLCA1-201ENST00000355430 LMF2Q9BU23 707 aaKnown RBP11.31□□□□□ -0.6
COLCA1-201ENST00000355430 PARPBPQ9NWS1 579 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms