RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 AKR7A3O95154 331 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 PMS2P2O95744 297 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 CD53P19397 219 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 GALP22466 123 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 CD96P40200 585 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 NAA10P41227 235 aaPredicted RBP20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 NOVA1P51513 510 aaKnown RBP20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 BLVRAP53004 296 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 LCN6P62502 163 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 SLC35A1P78382 337 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 MOGQ16653 247 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 CDONQ4KMG0 1287 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 VASH1Q7L8A9 365 aaPredicted RBP20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 PM20D2Q8IYS1 436 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 THAP4Q8WY91 577 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 MIB2Q96AX9 1013 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 PIGQQ9BRB3 760 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 UTP23Q9BRU9 249 aaKnown RBP20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 SLIRPQ9GZT3 109 aaKnown RBP20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 RNF167Q9H6Y7 350 aa20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 EXOSC4Q9NPD3 245 aaKnown RBP20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 RPH3AQ9Y2J0 694 aaPredicted RBP20.5■□□□□ 0.87
SCAMP3-202ENST00000355379 SLC22A23A1A5C7 686 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 OR2M5A3KFT3 312 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 NPIPA5E9PKD4 350 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 DCTN6O00399 190 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 HLA-DOBP13765 273 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 SHC1P29353 583 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 RPS25P62851 125 aaKnown RBP20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 HSF1Q00613 529 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 TMEM176BQ3YBM2 270 aaPredicted RBP20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 RAET1LQ5VY80 246 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 TUBA3EQ6PEY2 450 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 NHLRC1Q6VVB1 395 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 TMPPEQ6ZT21 453 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 TIGD4Q8IY51 512 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 RELTQ969Z4 430 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 C4orf36Q96KX1 117 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 NUAK2Q9H093 628 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 TMEM185BQ9H7F4 350 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 ZMIZ1Q9ULJ6 1067 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 NPIPA1Q9UND3 350 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 B9D1Q9UPM9 204 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 A3GALT2U3KPV4 340 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 WDFY3Q8IZQ1 3526 aa20.49■□□□□ 0.87
SCAMP3-202ENST00000355379 A0A0G2JMM0 328 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 LOC102725191A0A1B0GVB3 256 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 TRDV1A0A1B0GX56 115 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 A0A1W2PNR3 127 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 A0A1W2PPB8 328 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 A0A1W2PRS3 328 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 LRRC3CA6NJW4 275 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 KIR3DP1A8MWS1 328 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 ZNF670-ZNF695F2Z2N8 137 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 J3QLW9 94 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 GAAP10253 952 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 ZNF19P17023 458 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 CELP19835 753 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 FGF9P31371 208 aaPredicted RBP20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 P2RY4P51582 365 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 SOX8P57073 446 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 TGIF1Q15583 401 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 SLC35D2Q76EJ3 337 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 SSX6Q7RTT6 188 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 KDM8Q8N371 416 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 ZFP41Q8N8Y5 198 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 SMAP2Q8WU79 429 aaPredicted RBP20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 TRMT61AQ96FX7 289 aaKnown RBP20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 TXNL4BQ9NX01 149 aaKnown RBP20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 PMF1-BGLAPU3KQ54 211 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 FAM171A2A8MVW0 826 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 NEURL1O76050 574 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 INHBBP09529 407 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 IFNGR1P15260 489 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 CRABP1P29762 137 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 SFTPDP35247 375 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 HCCSP53701 268 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 OR12D2P58182 307 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 RAC1P63000 192 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 C19orf57Q0VDD7 668 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 MELKQ14680 651 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 ZNF511Q8NB15 262 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 KCNE4Q8WWG9 221 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 NXF2Q9GZY0 626 aaKnown RBP20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 DEPPQ9NTK1 212 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 B3GAT1Q9P2W7 334 aa20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 BOKQ9UMX3 212 aaPredicted RBP20.48■□□□□ 0.87
SCAMP3-202ENST00000355379 IGLV1-36A0A0B4J1U3 117 aa20.47■□□□□ 0.87
SCAMP3-202ENST00000355379 PNMA8CA0A1B0GUJ8 204 aa20.47■□□□□ 0.87
SCAMP3-202ENST00000355379 METTL15A6NJ78 407 aa20.47■□□□□ 0.87
SCAMP3-202ENST00000355379 GJE1A6NN92 205 aa20.47■□□□□ 0.87
SCAMP3-202ENST00000355379 SULT2B1O00204 365 aa20.47■□□□□ 0.87
SCAMP3-202ENST00000355379 PLPP2O43688 288 aa20.47■□□□□ 0.87
SCAMP3-202ENST00000355379 HLA-DPB1P04440 258 aa20.47■□□□□ 0.87
SCAMP3-202ENST00000355379 RRADP55042 308 aa20.47■□□□□ 0.87
SCAMP3-202ENST00000355379 B3GALT5-AS1P59052 145 aa20.47■□□□□ 0.87
SCAMP3-202ENST00000355379 POU3F1Q03052 451 aaPredicted RBP20.47■□□□□ 0.87
SCAMP3-202ENST00000355379 TRAM1Q15629 374 aa20.47■□□□□ 0.87
SCAMP3-202ENST00000355379 VASNQ6EMK4 673 aa20.47■□□□□ 0.87
SCAMP3-202ENST00000355379 ASCL5Q7RTU5 278 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms