RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ZNF195O14628 629 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 MGST1P10620 155 aaKnown RBP11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 MTHFD2P13995 350 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 BAXQ07812 192 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 AADACL3Q5VUY0 350 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 RNLSQ5VYX0 342 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 C5orf46Q6UWT4 87 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 GDF7Q7Z4P5 450 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 ARV1Q9H2C2 271 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 ACER3Q9NUN7 267 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 KLF15Q9UIH9 416 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 CCSO14618 274 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 GPR75O95800 540 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 DDAH2O95865 285 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 FABP1P07148 127 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 SFTPDP35247 375 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 GLYATL3Q5SZD4 288 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 COL13A1Q5TAT6 717 aaPredicted RBP11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR52W1Q6IF63 320 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 BAP18Q8IXM2 172 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 OPALINQ96PE5 141 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 SGPP1Q9BX95 441 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 C12orf10Q9HB07 376 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 LRP5LA4QPB2 252 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 TRAPPC2LH3BP13 241 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 AIFM1O95831 613 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 F13BP05160 661 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 METTL15P1P0C7V9 234 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 F2RL1P55085 397 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 S100A7AQ86SG5 101 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 LSMEM1Q8N8F7 131 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 SEMA4CQ9C0C4 833 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 CDH20Q9HBT6 801 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 HAO2Q9NYQ3 351 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZFP92A6NM28 416 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 SGK494L7N484 410 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 PNPP00491 289 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 THBS1P07996 1170 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 ACSM4P0C7M7 580 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 EXOSC7Q15024 291 aaKnown RBP11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 TESK1Q15569 626 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 C2orf76Q3KRA6 126 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 TMEM88Q6PEY1 159 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 DTD2Q96FN9 168 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 LTN1O94822 1766 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 A0A0J9YY10 115 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 GPR171O14626 319 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 LDB3O75112 727 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 CORO6Q6QEF8 472 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 PSMF1Q92530 271 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 FOXJ1Q92949 421 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 NMNAT3Q96T66 252 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLC17A9Q9BYT1 436 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 CYB5R1Q9UHQ9 305 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 PHF1O43189 567 aaPredicted RBP11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 P04436 131 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 NME1P15531 152 aaKnown RBP11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 TGFBR1P36897 503 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 CTSCP53634 463 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 FAM57BQ71RH2 274 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 RELL2Q8NC24 303 aaPredicted RBP11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR51A4Q8NGJ6 313 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 GNPNAT1Q96EK6 184 aaPredicted RBP11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 WDR83Q9BRX9 315 aaKnown RBP11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 CHST8Q9H2A9 424 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR52A1Q9UKL2 312 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 POMT2Q9UKY4 750 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 OSGIN2Q9Y236 505 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 USP3Q9Y6I4 520 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 TMEM127O75204 238 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 GLCEO94923 617 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 FCGR2AP12318 317 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 HHEXQ03014 270 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 KIAA0895LQ68EN5 471 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 Q6ZRG5 221 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 ADGRG3Q86Y34 549 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR2AK2Q8NG84 335 aa11.76□□□□□ -0.53
SYNCRIP-201ENST00000355238 BTBD17A6NE02 478 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 SULT2B1O00204 365 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 CA12O43570 354 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 HNRNPA1P09651 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 ACRP10323 421 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 KIR2DL3P43628 341 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 IHHQ14623 411 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 TMEM130Q8N3G9 435 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 TMEM255BQ8WV15 326 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 HIPK2Q9H2X6 1198 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 NECAP2Q9NVZ3 263 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 ARRDC5A6NEK1 342 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 ST8SIA3O43173 380 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 IQCF3P0C7M6 154 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 PTGER1P34995 402 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 APLNRP35414 380 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 NPY4RP50391 375 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZNF133P52736 654 aaPredicted RBP11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 PCBD1P61457 104 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLCO4C1Q6ZQN7 724 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 TSACCQ96A04 125 aaPredicted RBP11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 PCDHGA1Q9Y5H4 931 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 BCL2L11O43521 198 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms