RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 VN1R4Q7Z5H5 301 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 ZNF383Q8NA42 475 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 OR51L1Q8NGJ5 315 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 OR8S1Q8NH09 359 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 NUBPLQ8TB37 319 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 DUSP19Q8WTR2 217 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 HIST1H2ACQ93077 130 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 ZNF681Q96N22 645 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 OR52D1Q9H346 318 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 WSB2Q9NYS7 404 aaPredicted RBP8.59□□□□□ -1.03
SMG6-202ENST00000354901 USP36Q9P275 1121 aaKnown RBP8.59□□□□□ -1.03
SMG6-202ENST00000354901 FBXL4Q9UKA2 621 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 ZNF443Q9Y2A4 671 aaPredicted RBP8.59□□□□□ -1.03
SMG6-202ENST00000354901 PLEKHA6Q9Y2H5 1048 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 KCNK7Q9Y2U2 307 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 TRANK1O15050 2925 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 TRAV27A0A087WT01 109 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 hCG_1809904A0A1W2PP81 198 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 A0A1W2PR64 198 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 A0A1W2PRV1 198 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 KDM4EB2RXH2 506 aaPredicted RBP8.59□□□□□ -1.03
SMG6-202ENST00000354901 J3QLW9 94 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 CCSO14618 274 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 ZNF19P17023 458 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 GDI1P31150 447 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 ACTR1BP42025 376 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 POU3F4P49335 361 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 CCR9P51686 369 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 H2BFSP57053 126 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 ACTR1AP61163 376 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 EXOSC7Q15024 291 aaKnown RBP8.59□□□□□ -1.03
SMG6-202ENST00000354901 TAF8Q7Z7C8 310 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 LRRC25Q8N386 305 aaPredicted RBP8.59□□□□□ -1.03
SMG6-202ENST00000354901 FRMD1Q8N878 549 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 SFXN5Q8TD22 340 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 SLAMF9Q96A28 289 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 ARHGDIGQ99819 225 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 HRH4Q9H3N8 390 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 SRMSQ9H3Y6 488 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 SFXN1Q9H9B4 322 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 RPS10P5Q9NQ39 176 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 ZNF230Q9UIE0 474 aaPredicted RBP8.59□□□□□ -1.03
SMG6-202ENST00000354901 CBLCQ9ULV8 474 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 DAPL1A0PJW8 107 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 P2RX6O15547 441 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 MBP02144 154 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 BMP7P18075 431 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 NT5EP21589 574 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 ART1P52961 327 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 SRSF5Q13243 272 aaKnown RBP8.59□□□□□ -1.04
SMG6-202ENST00000354901 IKZF1Q13422 519 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 SLC22A10Q63ZE4 541 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 WDR88Q6ZMY6 472 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 SFTPA2Q8IWL1 248 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 AVL9Q8NBF6 648 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 OR5T3Q8NGG3 340 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 OR13C2Q8NGS9 318 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 LGALS14Q8TCE9 139 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 TCTEX1D2Q8WW35 142 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 PATE1Q8WXA2 126 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 NAA11Q9BSU3 229 aaPredicted RBP8.59□□□□□ -1.04
SMG6-202ENST00000354901 APOOQ9BUR5 198 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 SLC25A18Q9H1K4 315 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 STARD5Q9NSY2 213 aa8.59□□□□□ -1.04
SMG6-202ENST00000354901 A6NLC8 198 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 CACNB4O00305 520 aaPredicted RBP8.58□□□□□ -1.04
SMG6-202ENST00000354901 TERTO14746 1132 aaKnown RBP8.58□□□□□ -1.04
SMG6-202ENST00000354901 RNF13O43567 381 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 YIF1AO95070 293 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 FBP1P09467 338 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 MAKP20794 623 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 HTR2AP28223 471 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 FGF9P31371 208 aaPredicted RBP8.58□□□□□ -1.04
SMG6-202ENST00000354901 HCCSP53701 268 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 BPIFB3P59826 476 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 PPP2CBP62714 309 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 PPP2CAP67775 309 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 UBXN2BQ14CS0 331 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 MAJINQ3KP22 176 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 LIN54Q6MZP7 749 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 CLEC9AQ6UXN8 241 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 ZNF761Q86XN6 746 aaPredicted RBP8.58□□□□□ -1.04
SMG6-202ENST00000354901 C1orf216Q8TAB5 229 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 ALG8Q9BVK2 526 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 TAS2R10Q9NYW0 307 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 MRPS2Q9Y399 296 aaKnown RBP8.58□□□□□ -1.04
SMG6-202ENST00000354901 CNTRLQ7Z7A1 2325 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 TDRD6O60522 2096 aaKnown RBP8.58□□□□□ -1.04
SMG6-202ENST00000354901 ARGFXA6NJG6 315 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 PYCARD-AS1I3L0S3 204 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 SYT5O00445 386 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 SOX15O60248 233 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 APODP05090 189 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 CSN2P05814 226 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 SNRNP70P08621 437 aaKnown RBP8.58□□□□□ -1.04
SMG6-202ENST00000354901 ZGLP1P0C6A0 271 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 SLC35G6P0C7Q6 338 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 EPXP11678 715 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 LAMP2P13473 410 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 AP3S2P59780 193 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms