RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 GSTZ1O43708 216 aaPredicted RBP17.77■□□□□ 0.44
COL13A1-201ENST00000354547 UPK3AO75631 287 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 HIST1H2ABP04908 130 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 SULT1A3P0DMM9 295 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 SULT1A4P0DMN0 295 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 SKP2Q13309 424 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 Q499Y3 187 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 HIST3H2AQ7L7L0 130 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 UXS1Q8NBZ7 420 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 HIST1H2ACQ93077 130 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 TMEM106AQ96A25 262 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 AMELYQ99218 206 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 EVA1AQ9H8M9 152 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 FOXJ3Q9UPW0 622 aa17.77■□□□□ 0.44
COL13A1-201ENST00000354547 CABIN1Q9Y6J0 2220 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 LEUTXA8MZ59 168 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 CHURC1-FNTBB4DL54 471 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 DOK2O60496 412 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 SLC22A5O76082 557 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 RAF1P04049 648 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 CLPSP04118 112 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 FNTBP49356 437 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 P2RX1P51575 399 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 NLRC3Q7RTR2 1065 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 ZSCAN1Q8NBB4 408 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 PTPMT1Q8WUK0 201 aaPredicted RBP17.77■□□□□ 0.43
COL13A1-201ENST00000354547 PPP1R14AQ96A00 147 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 TCTN2Q96GX1 697 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 NOX3Q9HBY0 568 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 PRODH2Q9UF12 536 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 HIF3AQ9Y2N7 669 aa17.77■□□□□ 0.43
COL13A1-201ENST00000354547 MEIKINA0A087WXM9 373 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 GABARAPH6UMI1 98 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 ICOSLGO75144 302 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 ART1P52961 327 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 BLVRAP53004 296 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 BAIAP2L2Q6UXY1 529 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 FTMTQ8N4E7 242 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 WDR89Q96FK6 387 aaPredicted RBP17.76■□□□□ 0.43
COL13A1-201ENST00000354547 HRGP04196 525 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 PNMTP11086 282 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 FOXL2P58012 376 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 IGLV3-21P80748 117 aaPredicted RBP17.76■□□□□ 0.43
COL13A1-201ENST00000354547 ZP2Q05996 745 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 DEFB133Q30KQ1 61 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 LINC00303Q3SY05 128 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 ZNF684Q5T5D7 378 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 YOD1Q5VVQ6 348 aaPredicted RBP17.76■□□□□ 0.43
COL13A1-201ENST00000354547 MARCH3Q86UD3 253 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 TMEM151BQ8IW70 566 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 TRAF4Q9BUZ4 470 aaPredicted RBP17.76■□□□□ 0.43
COL13A1-201ENST00000354547 ZNF436Q9C0F3 470 aaPredicted RBP17.76■□□□□ 0.43
COL13A1-201ENST00000354547 PCNX3Q9H6A9 2034 aa17.76■□□□□ 0.43
COL13A1-201ENST00000354547 THADAQ6YHU6 1953 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 CAPZBP47756 277 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 HSD17B7P56937 341 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.75■□□□□ 0.43
COL13A1-201ENST00000354547 LRRN1Q6UXK5 716 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 GLB1L2Q8IW92 636 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 KCNG2Q9UJ96 466 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 ZNF749O43361 778 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 ENPP1P22413 925 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 BLKP51451 505 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 HSF2Q03933 536 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 ZNF782Q6ZMW2 699 aaPredicted RBP17.75■□□□□ 0.43
COL13A1-201ENST00000354547 MAMSTRQ6ZN01 415 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 C7orf50Q9BRJ6 194 aaKnown RBP17.75■□□□□ 0.43
COL13A1-201ENST00000354547 ACTR6Q9GZN1 396 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 MGAT4CQ9UBM8 478 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 GMEB2Q9UKD1 530 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 ELF5Q9UKW6 265 aaPredicted RBP17.75■□□□□ 0.43
COL13A1-201ENST00000354547 SLC6A5Q9Y345 797 aa17.75■□□□□ 0.43
COL13A1-201ENST00000354547 CTDSPLO15194 276 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 IFI6P09912 130 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 SLC37A1P57057 533 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 OC90Q02509 493 aaPredicted RBP17.74■□□□□ 0.43
COL13A1-201ENST00000354547 RFPL4BQ6ZWI9 263 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 OR52B4Q8NGK2 314 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 C17orf50Q8WW18 174 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 NXPE2Q96DL1 559 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 CLEC4MQ9H2X3 399 aaPredicted RBP17.74■□□□□ 0.43
COL13A1-201ENST00000354547 HEXA-AS1Q9H8Q6 139 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 CIB4A0PJX0 185 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 MPC2O95563 127 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 TPOP07202 933 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 CXCR1P25024 350 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 TAS2R20P59543 309 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 TSPAN5P62079 268 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 CCINQ13939 588 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 FGD2Q7Z6J4 655 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 ZNF440Q8IYI8 595 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 DND1Q8IYX4 353 aaKnown RBP17.74■□□□□ 0.43
COL13A1-201ENST00000354547 MEIOBQ8N635 442 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 LRRC75AQ8NAA5 344 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 OR51D1Q8NGF3 324 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 OR2G2Q8NGZ5 317 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 TSEN15Q8WW01 171 aaKnown RBP17.74■□□□□ 0.43
COL13A1-201ENST00000354547 SLC19A3Q9BZV2 496 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 CA10Q9NS85 328 aa17.74■□□□□ 0.43
COL13A1-201ENST00000354547 PLCL2Q9UPR0 1127 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms